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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
betT and betI are separated by 128 nucleotides
betI and betB are separated by 13 nucleotides
betB and betA are separated by 13 nucleotides
betA and MCAODC_28280 are separated by 1 nucleotides
MCAODC_28260: betT - choline BCCT transporter BetT, at 2,401,308 to 2,403,341
betT
MCAODC_28265: betI - transcriptional regulator BetI, at 2,403,470 to 2,404,057
betI
MCAODC_28270: betB - betaine-aldehyde dehydrogenase, at 2,404,071 to 2,405,543
betB
MCAODC_28275: betA - choline dehydrogenase, at 2,405,557 to 2,407,245
betA
MCAODC_28280: MCAODC_28280 - hypothetical protein, at 2,407,247 to 2,407,498
_28280
Group
Condition
MCAODC
_28260
MCAODC
_28265
MCAODC
_28270
MCAODC
_28275
MCAODC
_28280
betT
betI
betB
betA
phage
Bas09
-0.1
-1.0
+0.0
+0.0
-0.3
carbon source
Sodium-DL-Lactate
-0.1
-0.1
-0.1
-0.0
-0.9
phage
TP9
-0.1
-0.5
-0.1
+0.0
-0.5
phage
Bas09
-0.0
-0.3
+0.1
-0.0
-0.7
phage
WM_EV240
-0.1
-1.3
+0.1
-0.2
+0.5
phage
Bas14
-0.3
-0.1
-0.3
-0.0
-0.1
carbon source
L-Arabinose
-0.1
+0.0
-0.1
-0.3
-0.4
carbon source
Casamino-acids
-0.1
-0.4
+0.2
+0.0
-0.3
phage
WM_EV240
-0.3
-0.0
-0.5
+0.2
+0.1
phage
WM_Bas09
-0.3
-0.1
+0.0
+0.1
-0.1
carbon source
D-Glucose
-0.0
+0.1
-0.2
-0.1
-0.0
phage
WM_TP9
-0.1
-0.1
-0.1
+0.2
-0.0
carbon source
D-Glucose
+0.1
-0.4
+0.5
-0.1
-0.3
carbon source
Casamino-acids
-0.1
-0.0
+0.1
-0.1
-0.0
phage
Bas14
-0.1
-0.0
-0.2
+0.1
+0.1
phage
EV240
-0.2
-0.0
+0.2
-0.1
+0.1
no phage control
Control_ECRC101_WM
-0.0
+0.0
-0.1
+0.1
-0.1
phage
EV240
-0.1
+0.0
-0.0
+0.2
-0.1
carbon source
Sodium-DL-Lactate
-0.1
+0.4
-0.0
-0.2
-0.2
phage
WM_Bas41
-0.2
+0.0
+0.1
+0.0
-0.0
phage
WM_Bas14
-0.0
+0.2
+0.2
-0.0
-0.2
phage
WM_Bas09
-0.0
+0.1
-0.1
+0.1
+0.2
phage
WM_TP9
-0.1
+0.2
-0.2
+0.0
+0.3
no phage control
Control_ECRC101_WM
+0.1
+0.2
-0.1
+0.0
+0.2
carbon source
L-Arabinose
-0.0
+0.4
+0.2
-0.2
+0.1
phage
WM_RB68
-0.1
+0.1
+0.1
+0.0
+0.4
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MCAODC_28270
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