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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
prpB and prpR are separated by 238 nucleotides
prpR and yahO are separated by 97 nucleotides
yahO and yahN are separated by 185 nucleotides
yahN and yahL are separated by 730 nucleotides
MCAODC_28130: prpB - methylisocitrate lyase, at 2,374,198 to 2,375,088
prpB
MCAODC_28135: prpR - propionate catabolism operon regulatory protein PrpR, at 2,375,327 to 2,376,913
prpR
MCAODC_28140: yahO - DUF1471 domain-containing protein, at 2,377,011 to 2,377,286
yahO
MCAODC_28145: yahN - Uncharacterized membrane protein YahN, at 2,377,472 to 2,378,104
yahN
MCAODC_28150: yahL - Uncharacterized protein YahL, at 2,378,835 to 2,379,596
yahL
Group
Condition
MCAODC
_28130
MCAODC
_28135
MCAODC
_28140
MCAODC
_28145
MCAODC
_28150
prpB
prpR
yahO
yahN
yahL
phage
Bas14
-0.1
-0.2
-1.8
-0.1
+0.1
phage
Bas14
+0.2
+0.0
-1.0
-0.2
-0.5
phage
WM_Bas41
-0.3
-0.1
-1.0
-0.2
+0.1
carbon source
D-Glucose
-0.1
+0.1
-0.5
-0.2
-0.6
phage
WM_EV240
-0.1
-0.1
-0.3
+0.2
-0.9
phage
Bas09
-0.1
-0.1
-0.7
-0.0
-0.3
phage
Bas09
-0.0
+0.0
-0.1
-0.3
-0.6
phage
EV240
-0.4
-0.1
-0.2
-0.3
+0.3
carbon source
Sodium-DL-Lactate
-0.2
+0.1
+0.0
-0.3
-0.3
phage
WM_Bas14
-0.0
-0.0
-0.5
-0.1
-0.0
carbon source
L-Arabinose
-0.3
-0.1
-0.4
+0.1
+0.1
carbon source
Casamino-acids
-0.3
+0.1
-0.5
-0.0
+0.3
phage
WM_TP9
-0.1
-0.0
+0.3
-0.0
-0.4
phage
EV240
-0.1
-0.1
-0.5
+0.0
+0.7
no phage control
Control_ECRC101_WM
+0.1
+0.1
+0.1
-0.1
-0.2
phage
WM_Bas09
+0.2
+0.1
-0.1
-0.0
+0.0
phage
TP9
+0.3
+0.0
-0.7
-0.2
+0.8
phage
WM_EV240
-0.1
+0.0
+0.2
-0.1
+0.4
carbon source
L-Arabinose
-0.0
+0.0
+0.3
+0.2
-0.0
carbon source
Casamino-acids
-0.0
+0.1
+0.6
+0.2
-0.2
phage
WM_Bas09
+0.2
-0.2
+0.6
-0.1
+0.2
carbon source
D-Glucose
-0.0
+0.1
+0.4
+0.1
+0.2
phage
WM_RB68
-0.0
+0.2
+0.9
+0.1
-0.0
phage
WM_TP9
+0.4
+0.2
+0.2
-0.2
+0.6
no phage control
Control_ECRC101_WM
+0.0
-0.1
+1.0
+0.1
+0.3
carbon source
Sodium-DL-Lactate
+0.1
+0.2
+0.5
+0.1
+0.8
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