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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
codB and prpE are separated by 893 nucleotides
prpE and MCAODC_28120 are separated by 39 nucleotides
MCAODC_28120 and prpC are separated by 33 nucleotides
prpC and prpB are separated by 155 nucleotides
MCAODC_28080: codB - cytosine permease, at 2,367,309 to 2,368,568
codB
MCAODC_28115: prpE - propionate--CoA ligase, at 2,369,462 to 2,371,348
prpE
MCAODC_28120: MCAODC_28120 - bifunctional 2-methylcitrate dehydratase/aconitate hydratase, at 2,371,388 to 2,372,839
_28120
MCAODC_28125: prpC - 2-methylcitrate synthase, at 2,372,873 to 2,374,042
prpC
MCAODC_28130: prpB - methylisocitrate lyase, at 2,374,198 to 2,375,088
prpB
Group
Condition
MCAODC
_28080
MCAODC
_28115
MCAODC
_28120
MCAODC
_28125
MCAODC
_28130
codB
prpE
prpC
prpB
phage
EV240
-0.2
-0.3
-0.4
-0.4
-0.4
carbon source
Casamino-acids
-0.2
-0.0
+0.0
+0.0
-0.3
phage
WM_TP9
+0.0
-0.1
-0.2
+0.0
-0.1
phage
WM_EV240
-0.1
-0.0
-0.2
+0.0
-0.1
phage
EV240
-0.1
-0.1
+0.0
-0.1
-0.1
phage
WM_EV240
+0.0
-0.2
+0.0
-0.1
-0.1
carbon source
Casamino-acids
-0.2
-0.1
+0.0
-0.0
-0.0
phage
WM_Bas41
+0.2
-0.3
+0.1
+0.0
-0.3
phage
Bas14
-0.0
-0.2
-0.0
+0.0
-0.1
carbon source
L-Arabinose
+0.2
+0.0
-0.1
-0.2
-0.3
carbon source
D-Glucose
-0.2
-0.0
-0.1
+0.0
-0.0
carbon source
L-Arabinose
-0.3
+0.0
+0.3
-0.2
-0.0
no phage control
Control_ECRC101_WM
-0.1
-0.1
-0.1
+0.1
+0.0
phage
TP9
-0.1
-0.1
-0.1
-0.1
+0.3
no phage control
Control_ECRC101_WM
-0.1
-0.1
+0.1
-0.2
+0.1
phage
WM_Bas14
-0.1
-0.1
-0.0
+0.2
-0.0
phage
Bas09
-0.0
-0.1
+0.3
-0.1
-0.0
phage
Bas14
+0.0
-0.1
-0.1
+0.1
+0.2
phage
Bas09
+0.1
-0.0
+0.1
-0.0
-0.1
carbon source
Sodium-DL-Lactate
+0.1
-0.0
+0.1
+0.0
-0.2
carbon source
Sodium-DL-Lactate
-0.1
-0.0
-0.0
+0.1
+0.1
carbon source
D-Glucose
+0.0
+0.0
+0.0
+0.1
-0.1
phage
WM_TP9
-0.0
-0.0
-0.1
-0.1
+0.4
phage
WM_Bas09
-0.0
-0.0
-0.1
+0.1
+0.2
phage
WM_Bas09
+0.2
-0.1
+0.2
-0.2
+0.2
phage
WM_RB68
+0.1
-0.1
+0.2
+0.2
-0.0
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