Fitness for 5 genes in Escherichia coli ECRC101

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500 ntmhpD and mhpC are separated by 9 nucleotidesmhpC and mhpB are separated by 17 nucleotidesmhpB and mhpA are separated by 1 nucleotidesmhpA and mhpR are separated by 76 nucleotides MCAODC_28000: mhpD - 2-keto-4-pentenoate hydratase, at 2,348,945 to 2,349,754 mhpD MCAODC_28005: mhpC - 2-hydroxy-6-oxonona-2,4-dienedioate hydrolase, at 2,349,764 to 2,350,630 mhpC MCAODC_28010: mhpB - 3-carboxyethylcatechol 2,3-dioxygenase, at 2,350,648 to 2,351,592 mhpB MCAODC_28015: mhpA - bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase, at 2,351,594 to 2,353,258 mhpA MCAODC_28020: mhpR - DNA-binding transcriptional regulator, at 2,353,335 to 2,354,282 mhpR
Group Condition MCAODC_28000 MCAODC_28005 MCAODC_28010 MCAODC_28015 MCAODC_28020
mhpD mhpC mhpB mhpA mhpR
phage TP9 +0.3 -0.2 -0.5 -0.1 -0.3
phage EV240 -0.0 -0.2 -0.6 +0.1 -0.1
phage Bas09 -0.1 -0.3 -0.2 +0.1 -0.0
carbon source Casamino-acids -0.7 +0.1 +0.2 +0.0 -0.2
phage EV240 -0.1 -0.4 +0.0 +0.0 +0.0
phage Bas09 -0.2 -0.1 -0.0 +0.0 -0.2
carbon source L-Arabinose -0.2 +0.1 +0.0 -0.1 -0.2
phage WM_TP9 +0.1 -0.3 -0.4 +0.1 +0.1
carbon source Casamino-acids +0.0 -0.1 +0.1 +0.0 -0.3
no phage control Control_ECRC101_WM -0.1 +0.0 -0.1 +0.1 -0.2
phage WM_RB68 +0.0 -0.2 -0.1 -0.1 +0.0
phage Bas14 -0.1 -0.2 -0.1 -0.2 +0.3
phage WM_TP9 -0.0 -0.0 -0.0 -0.0 -0.1
no phage control Control_ECRC101_WM +0.2 -0.2 -0.2 +0.0 +0.0
phage WM_Bas14 -0.0 -0.1 -0.0 +0.1 +0.0
carbon source Sodium-DL-Lactate +0.0 +0.1 +0.0 +0.1 -0.1
phage WM_Bas41 +0.1 +0.2 -0.3 -0.0 +0.1
phage WM_EV240 -0.1 -0.0 +0.1 +0.1 +0.0
phage Bas14 -0.0 +0.1 -0.2 +0.1 +0.2
carbon source Sodium-DL-Lactate +0.2 +0.3 -0.1 -0.0 -0.1
carbon source D-Glucose -0.0 -0.0 -0.0 +0.0 +0.3
phage WM_Bas09 +0.1 +0.2 -0.0 +0.2 -0.2
phage WM_Bas09 +0.1 -0.1 +0.1 -0.1 +0.3
carbon source D-Glucose -0.1 +0.5 -0.0 +0.1 -0.0
carbon source L-Arabinose -0.1 +0.2 +0.0 +0.1 +0.1
phage WM_EV240 +0.1 +0.1 -0.1 +0.0 +0.4
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