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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
mhpD and mhpC are separated by 9 nucleotides
mhpC and mhpB are separated by 17 nucleotides
mhpB and mhpA are separated by 1 nucleotides
mhpA and mhpR are separated by 76 nucleotides
MCAODC_28000: mhpD - 2-keto-4-pentenoate hydratase, at 2,348,945 to 2,349,754
mhpD
MCAODC_28005: mhpC - 2-hydroxy-6-oxonona-2,4-dienedioate hydrolase, at 2,349,764 to 2,350,630
mhpC
MCAODC_28010: mhpB - 3-carboxyethylcatechol 2,3-dioxygenase, at 2,350,648 to 2,351,592
mhpB
MCAODC_28015: mhpA - bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase, at 2,351,594 to 2,353,258
mhpA
MCAODC_28020: mhpR - DNA-binding transcriptional regulator, at 2,353,335 to 2,354,282
mhpR
Group
Condition
MCAODC
_28000
MCAODC
_28005
MCAODC
_28010
MCAODC
_28015
MCAODC
_28020
mhpD
mhpC
mhpB
mhpA
mhpR
phage
TP9
+0.3
-0.2
-0.5
-0.1
-0.3
phage
EV240
-0.0
-0.2
-0.6
+0.1
-0.1
phage
Bas09
-0.1
-0.3
-0.2
+0.1
-0.0
carbon source
Casamino-acids
-0.7
+0.1
+0.2
+0.0
-0.2
phage
EV240
-0.1
-0.4
+0.0
+0.0
+0.0
phage
Bas09
-0.2
-0.1
-0.0
+0.0
-0.2
carbon source
L-Arabinose
-0.2
+0.1
+0.0
-0.1
-0.2
phage
WM_TP9
+0.1
-0.3
-0.4
+0.1
+0.1
carbon source
Casamino-acids
+0.0
-0.1
+0.1
+0.0
-0.3
no phage control
Control_ECRC101_WM
-0.1
+0.0
-0.1
+0.1
-0.2
phage
WM_RB68
+0.0
-0.2
-0.1
-0.1
+0.0
phage
Bas14
-0.1
-0.2
-0.1
-0.2
+0.3
phage
WM_TP9
-0.0
-0.0
-0.0
-0.0
-0.1
no phage control
Control_ECRC101_WM
+0.2
-0.2
-0.2
+0.0
+0.0
phage
WM_Bas14
-0.0
-0.1
-0.0
+0.1
+0.0
carbon source
Sodium-DL-Lactate
+0.0
+0.1
+0.0
+0.1
-0.1
phage
WM_Bas41
+0.1
+0.2
-0.3
-0.0
+0.1
phage
WM_EV240
-0.1
-0.0
+0.1
+0.1
+0.0
phage
Bas14
-0.0
+0.1
-0.2
+0.1
+0.2
carbon source
Sodium-DL-Lactate
+0.2
+0.3
-0.1
-0.0
-0.1
carbon source
D-Glucose
-0.0
-0.0
-0.0
+0.0
+0.3
phage
WM_Bas09
+0.1
+0.2
-0.0
+0.2
-0.2
phage
WM_Bas09
+0.1
-0.1
+0.1
-0.1
+0.3
carbon source
D-Glucose
-0.1
+0.5
-0.0
+0.1
-0.0
carbon source
L-Arabinose
-0.1
+0.2
+0.0
+0.1
+0.1
phage
WM_EV240
+0.1
+0.1
-0.1
+0.0
+0.4
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