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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
aroM and yaiA are separated by 257 nucleotides
yaiA and aroL are separated by 49 nucleotides
aroL and yaiI are separated by 182 nucleotides
yaiI and proC are separated by 119 nucleotides
MCAODC_27815: aroM - Protein AroM, at 2,312,599 to 2,313,276
aroM
MCAODC_27820: yaiA - Uncharacterized protein YaiA, at 2,313,534 to 2,313,725
yaiA
MCAODC_27825: aroL - shikimate kinase AroL, at 2,313,775 to 2,314,299
aroL
MCAODC_27830: yaiI - YaiI/YqxD family protein, at 2,314,482 to 2,314,940
yaiI
MCAODC_27835: proC - pyrroline-5-carboxylate reductase, at 2,315,060 to 2,315,869
proC
Group
Condition
MCAODC
_27815
MCAODC
_27820
MCAODC
_27825
MCAODC
_27830
MCAODC
_27835
aroM
yaiA
aroL
yaiI
proC
carbon source
Sodium-DL-Lactate
-1.4
-0.0
-0.2
+0.0
-3.9
carbon source
Sodium-DL-Lactate
-1.5
-0.1
-0.1
-0.3
-3.5
carbon source
L-Arabinose
-0.1
+0.0
-0.8
+0.2
-3.9
carbon source
D-Glucose
+0.1
-0.2
-0.4
+0.2
-4.1
carbon source
D-Glucose
+0.0
+0.3
-0.7
-0.0
-2.9
carbon source
L-Arabinose
-0.2
-0.2
-0.7
-0.3
-2.0
phage
WM_EV240
-0.5
+0.2
-0.8
-0.5
-0.9
no phage control
Control_ECRC101_WM
-0.0
+0.1
-1.1
-0.3
-0.9
phage
EV240
-0.0
+0.1
-0.0
+0.1
-2.1
phage
EV240
-0.2
-0.1
-0.1
+0.2
-1.8
no phage control
Control_ECRC101_WM
-0.4
-0.0
-0.5
+0.0
-0.8
phage
WM_Bas41
-0.2
-0.1
-0.2
-0.2
-0.9
phage
Bas14
+0.0
-0.1
-0.2
-0.3
-0.9
carbon source
Casamino-acids
-0.3
+0.3
+0.1
-0.1
-1.3
phage
WM_RB68
+0.1
-0.1
-0.3
-0.1
-0.7
phage
Bas09
-0.7
+0.2
-0.1
+0.0
-0.5
phage
WM_Bas14
-0.1
-0.0
-0.1
-0.2
-0.6
phage
WM_TP9
-0.3
+0.1
+0.5
+0.1
-1.0
phage
WM_EV240
-0.3
+0.1
+0.1
+0.2
-0.7
phage
WM_TP9
-0.1
+0.0
-0.1
-0.1
-0.3
phage
WM_Bas09
+0.0
+0.4
-0.4
+0.1
-0.6
phage
Bas09
-0.2
+0.4
+0.3
+0.1
-0.9
carbon source
Casamino-acids
-0.4
+0.3
-0.0
+0.0
-0.2
phage
WM_Bas09
-0.1
+0.5
+0.2
+0.0
-0.8
phage
TP9
+0.1
+0.1
+0.5
-0.1
-0.7
phage
Bas14
-0.2
+0.4
+0.8
+0.2
-0.5
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MCAODC_27825
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