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Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
thiL and nusB are separated by 77 nucleotides
nusB and ribE are separated by 19 nucleotides
ribE and ribD are separated by 88 nucleotides
ribD and nrdR are separated by 3 nucleotides
MCAODC_27665: thiL - thiamine-phosphate kinase, at 2,279,616 to 2,280,593
thiL
MCAODC_27670: nusB - transcription antitermination factor NusB, at 2,280,671 to 2,281,090
nusB
MCAODC_27675: ribE - 6,7-dimethyl-8-ribityllumazine synthase, at 2,281,110 to 2,281,580
ribE
MCAODC_27680: ribD - bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD, at 2,281,669 to 2,282,772
ribD
MCAODC_27685: nrdR - transcriptional regulator NrdR, at 2,282,776 to 2,283,225
nrdR
Group
Condition
MCAODC
_27665
MCAODC
_27670
MCAODC
_27675
MCAODC
_27680
MCAODC
_27685
thiL
nusB
ribE
ribD
nrdR
carbon source
Casamino-acids
N.D.
N.D.
N.D.
N.D.
-1.9
phage
TP9
N.D.
N.D.
N.D.
N.D.
-0.8
carbon source
L-Arabinose
N.D.
N.D.
N.D.
N.D.
-0.6
carbon source
Sodium-DL-Lactate
N.D.
N.D.
N.D.
N.D.
-0.6
phage
Bas14
N.D.
N.D.
N.D.
N.D.
-0.5
phage
WM_Bas09
N.D.
N.D.
N.D.
N.D.
-0.5
carbon source
Casamino-acids
N.D.
N.D.
N.D.
N.D.
-0.4
carbon source
Sodium-DL-Lactate
N.D.
N.D.
N.D.
N.D.
-0.3
phage
EV240
N.D.
N.D.
N.D.
N.D.
-0.3
phage
WM_TP9
N.D.
N.D.
N.D.
N.D.
-0.2
phage
Bas09
N.D.
N.D.
N.D.
N.D.
-0.2
phage
WM_Bas41
N.D.
N.D.
N.D.
N.D.
-0.2
phage
WM_TP9
N.D.
N.D.
N.D.
N.D.
-0.2
carbon source
L-Arabinose
N.D.
N.D.
N.D.
N.D.
-0.1
carbon source
D-Glucose
N.D.
N.D.
N.D.
N.D.
-0.1
no phage control
Control_ECRC101_WM
N.D.
N.D.
N.D.
N.D.
-0.1
phage
WM_Bas14
N.D.
N.D.
N.D.
N.D.
-0.1
carbon source
D-Glucose
N.D.
N.D.
N.D.
N.D.
-0.1
no phage control
Control_ECRC101_WM
N.D.
N.D.
N.D.
N.D.
+0.0
phage
EV240
N.D.
N.D.
N.D.
N.D.
+0.0
phage
WM_Bas09
N.D.
N.D.
N.D.
N.D.
+0.0
phage
WM_RB68
N.D.
N.D.
N.D.
N.D.
+0.0
phage
WM_EV240
N.D.
N.D.
N.D.
N.D.
+0.2
phage
Bas09
N.D.
N.D.
N.D.
N.D.
+0.3
phage
Bas14
N.D.
N.D.
N.D.
N.D.
+0.5
phage
WM_EV240
N.D.
N.D.
N.D.
N.D.
+1.1
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