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Protein
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Fitness for 5 genes in
Escherichia coli ECRC101
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500 nt
ylaC and pdeB are separated by 163 nucleotides
pdeB and ybaA are separated by 41 nucleotides
ybaA and atl are separated by 378 nucleotides
atl and ybaY are separated by 32 nucleotides
MCAODC_27450: ylaC - Inner membrane protein YlaC, at 2,235,166 to 2,235,636
ylaC
MCAODC_27455: pdeB - cyclic-guanylate-specific phosphodiesterase PdeB, at 2,235,800 to 2,237,350
pdeB
MCAODC_27460: ybaA - Uncharacterized protein YbaA, at 2,237,392 to 2,237,745
ybaA
MCAODC_27470: atl - DNA base-flipping protein, at 2,238,124 to 2,238,435
atl
MCAODC_27475: ybaY - Uncharacterized lipoprotein YbaY, at 2,238,468 to 2,239,040
ybaY
Group
Condition
MCAODC
_27450
MCAODC
_27455
MCAODC
_27460
MCAODC
_27470
MCAODC
_27475
ylaC
pdeB
ybaA
atl
ybaY
phage
EV240
-0.5
-0.1
-0.4
-0.4
-0.3
phage
Bas14
+0.0
-0.7
-0.3
-0.6
+0.3
phage
WM_Bas09
-0.2
-0.1
-0.4
-0.1
-0.0
carbon source
Sodium-DL-Lactate
-0.2
+0.1
-0.7
-0.1
+0.0
phage
Bas14
-0.4
-0.7
-0.0
+0.5
-0.1
carbon source
D-Glucose
-0.2
+0.0
+0.2
-0.1
-0.5
phage
Bas09
-0.2
+0.0
-0.8
+0.3
+0.1
carbon source
Sodium-DL-Lactate
-0.3
+0.1
-0.2
+0.1
+0.1
no phage control
Control_ECRC101_WM
+0.3
+0.1
-0.7
-0.2
+0.2
phage
WM_Bas41
+0.4
-0.0
+0.3
-0.4
-0.4
phage
WM_EV240
-0.1
+0.1
+0.1
+0.0
-0.1
carbon source
L-Arabinose
-0.6
+0.3
-0.1
+0.4
+0.0
phage
WM_TP9
-0.0
+0.1
-0.2
+0.0
+0.1
phage
Bas09
-0.0
+0.2
-0.1
+0.1
-0.1
carbon source
Casamino-acids
-0.2
+0.1
+0.2
-0.0
-0.0
carbon source
L-Arabinose
-0.2
+0.0
-0.2
+0.1
+0.3
carbon source
D-Glucose
-0.3
+0.1
-0.5
+0.4
+0.3
phage
WM_TP9
+0.0
+0.0
-0.1
+0.2
+0.1
no phage control
Control_ECRC101_WM
+0.1
-0.0
+0.3
+0.0
-0.2
phage
WM_RB68
+0.3
+0.0
-0.4
+0.4
-0.1
phage
WM_Bas14
-0.0
+0.0
+0.0
+0.1
+0.2
phage
TP9
+0.3
+0.3
-0.2
-0.0
-0.1
phage
EV240
-0.1
+0.0
-0.1
+0.5
+0.2
phage
WM_Bas09
-0.3
+0.3
+0.4
+0.2
-0.0
carbon source
Casamino-acids
-0.3
+0.1
-0.2
+0.3
+0.6
phage
WM_EV240
-0.2
+0.1
+0.1
+0.6
+0.4
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