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Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
gcl and allR are separated by 89 nucleotides
allR and allA are separated by 77 nucleotides
allA and allS are separated by 229 nucleotides
allS and mnmH are separated by 68 nucleotides
MCAODC_27140: gcl - glyoxylate carboligase, at 2,152,511 to 2,154,292
gcl
MCAODC_27145: allR - HTH-type transcriptional repressor AllR, at 2,154,382 to 2,155,197
allR
MCAODC_27150: allA - ureidoglycolate lyase, at 2,155,275 to 2,155,757
allA
MCAODC_27155: allS - HTH-type transcriptional activator AllS, at 2,155,987 to 2,156,913
allS
MCAODC_27160: mnmH - tRNA 2-selenouridine(34) synthase MnmH, at 2,156,982 to 2,158,076
mnmH
Group
Condition
MCAODC
_27140
MCAODC
_27145
MCAODC
_27150
MCAODC
_27155
MCAODC
_27160
gcl
allR
allA
allS
mnmH
phage
EV240
+0.1
-0.2
-0.9
+0.2
-0.1
no phage control
Control_ECRC101_WM
+0.0
-0.2
-0.4
-0.3
+0.1
phage
WM_Bas09
+0.0
-0.3
-0.3
+0.1
-0.1
phage
TP9
+0.1
-0.3
-0.4
+0.0
+0.1
phage
WM_Bas41
-0.2
-0.0
-0.3
-0.1
+0.2
phage
Bas09
-0.0
-0.1
-0.2
-0.0
-0.0
carbon source
D-Glucose
-0.2
+0.0
-0.4
+0.3
-0.0
phage
WM_EV240
+0.0
+0.1
-0.4
+0.0
-0.0
phage
EV240
-0.0
+0.3
-0.2
+0.3
-0.4
carbon source
L-Arabinose
-0.1
-0.1
+0.2
+0.0
-0.0
phage
WM_TP9
+0.2
-0.1
-0.2
+0.2
+0.1
phage
WM_Bas14
+0.1
+0.2
-0.5
+0.2
+0.2
carbon source
Sodium-DL-Lactate
+0.2
-0.0
-0.0
-0.1
+0.1
phage
WM_EV240
+0.1
+0.2
-0.5
+0.2
+0.1
carbon source
D-Glucose
+0.1
-0.1
+0.3
+0.1
-0.1
phage
WM_TP9
+0.2
-0.1
-0.2
+0.1
+0.2
phage
Bas09
-0.1
+0.0
-0.1
+0.4
+0.0
phage
WM_Bas09
+0.2
-0.0
-0.1
+0.2
-0.0
no phage control
Control_ECRC101_WM
+0.0
+0.1
+0.3
-0.1
+0.1
phage
Bas14
+0.4
-0.2
+0.1
+0.2
+0.1
carbon source
L-Arabinose
+0.3
+0.3
+0.1
-0.1
+0.0
phage
WM_RB68
+0.1
-0.0
+0.2
+0.2
+0.3
carbon source
Sodium-DL-Lactate
+0.2
+0.2
+0.1
+0.2
-0.0
carbon source
Casamino-acids
+0.2
+0.3
-0.1
+0.4
+0.1
carbon source
Casamino-acids
+0.3
+0.2
+0.1
+0.2
+0.2
phage
Bas14
+0.2
-0.2
+0.5
+0.3
+0.2
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