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Protein
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Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
pagP and dcuC are separated by 588 nucleotides
dcuC and dpiA are separated by 40 nucleotides
dpiA and dpiB overlap by 32 nucleotides
dpiB and citC are separated by 379 nucleotides
MCAODC_26640: pagP - lipid IV(A) palmitoyltransferase PagP, at 2,042,321 to 2,042,881
pagP
MCAODC_26645: dcuC - anaerobic C4-dicarboxylate transporter DcuC, at 2,043,470 to 2,044,855
dcuC
MCAODC_26650: dpiA - two-component response regulator DpiA, at 2,044,896 to 2,045,576
dpiA
MCAODC_26655: dpiB - sensor histidine kinase DpiB, at 2,045,545 to 2,047,203
dpiB
MCAODC_26660: citC - [citrate (pro-3S)-lyase] ligase, at 2,047,583 to 2,048,641
citC
Group
Condition
MCAODC
_26640
MCAODC
_26645
MCAODC
_26650
MCAODC
_26655
MCAODC
_26660
pagP
dcuC
dpiA
dpiB
citC
phage
WM_Bas09
-0.2
-0.0
-0.1
+0.1
-0.2
carbon source
L-Arabinose
-0.1
-0.0
-0.0
-0.1
+0.1
phage
WM_TP9
-0.1
+0.1
-0.1
-0.1
+0.1
phage
TP9
+0.3
-0.1
-0.1
-0.1
-0.1
phage
WM_Bas09
-0.1
+0.0
+0.1
-0.1
+0.1
phage
EV240
+0.5
-0.2
+0.1
-0.3
+0.0
carbon source
D-Glucose
+0.0
-0.0
+0.0
-0.2
+0.3
carbon source
Sodium-DL-Lactate
+0.3
+0.0
+0.1
-0.1
+0.0
carbon source
D-Glucose
+0.1
+0.1
+0.1
+0.1
-0.1
phage
Bas09
-0.0
+0.0
+0.0
-0.1
+0.3
phage
WM_EV240
-0.1
-0.1
+0.0
+0.2
+0.3
carbon source
Casamino-acids
-0.2
+0.2
+0.2
+0.1
-0.0
phage
WM_TP9
+0.3
+0.0
+0.1
+0.2
-0.2
no phage control
Control_ECRC101_WM
+0.1
+0.0
+0.0
-0.0
+0.4
carbon source
Sodium-DL-Lactate
+0.1
+0.2
+0.1
+0.0
+0.0
phage
WM_RB68
+0.2
+0.1
+0.1
-0.1
+0.3
phage
WM_Bas41
-0.0
-0.2
+0.3
+0.1
+0.4
phage
Bas09
+0.2
+0.1
-0.1
-0.0
+0.4
carbon source
Casamino-acids
+0.1
+0.1
+0.2
-0.0
+0.2
phage
WM_Bas14
+0.2
+0.1
+0.1
+0.1
+0.1
phage
WM_EV240
+0.3
+0.1
+0.2
+0.1
-0.0
carbon source
L-Arabinose
+0.3
+0.1
+0.3
+0.1
+0.1
phage
Bas14
+0.3
-0.0
+0.4
+0.2
-0.1
phage
Bas14
+0.2
-0.1
+0.1
+0.3
+0.4
phage
EV240
+0.2
+0.0
+0.4
+0.3
+0.4
no phage control
Control_ECRC101_WM
+0.2
+0.1
+0.4
+0.3
+0.5
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