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Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
kdpB and kdpC are separated by 8 nucleotides
kdpC and kdpD overlap by 8 nucleotides
kdpD and kdpE overlap by 4 nucleotides
kdpE and speFL are separated by 274 nucleotides
MCAODC_26280: kdpB - potassium-transporting ATPase subunit KdpB, at 1,975,330 to 1,977,378
kdpB
MCAODC_26285: kdpC - K(+)-transporting ATPase subunit C, at 1,977,387 to 1,977,959
kdpC
MCAODC_26290: kdpD - two-component system sensor histidine kinase KdpD, at 1,977,952 to 1,980,636
kdpD
MCAODC_26295: kdpE - two-component system response regulator KdpE, at 1,980,633 to 1,981,310
kdpE
MCAODC_26300: speFL - Leader peptide SpeFL, at 1,981,585 to 1,981,689
speFL
Group
Condition
MCAODC
_26280
MCAODC
_26285
MCAODC
_26290
MCAODC
_26295
MCAODC
_26300
kdpB
kdpC
kdpD
kdpE
speFL
phage
WM_EV240
-0.0
-0.1
+0.0
-0.1
-2.5
phage
WM_TP9
-0.2
-0.1
+0.0
-0.1
-0.8
carbon source
Sodium-DL-Lactate
-0.3
+0.2
-0.2
-0.1
-0.4
carbon source
D-Glucose
-0.1
+0.1
+0.0
+0.1
-0.7
phage
WM_Bas09
-0.1
-0.2
+0.0
+0.1
-0.3
carbon source
L-Arabinose
-0.1
-0.4
-0.0
+0.0
+0.2
carbon source
D-Glucose
-0.0
-0.1
+0.0
-0.2
+0.0
no phage control
Control_ECRC101_WM
-0.0
-0.2
-0.0
+0.1
+0.1
carbon source
Sodium-DL-Lactate
-0.2
-0.2
+0.1
+0.0
+0.2
phage
TP9
-0.2
+0.2
+0.1
-0.2
+0.3
phage
Bas09
-0.1
+0.0
-0.0
-0.1
+0.2
carbon source
L-Arabinose
+0.0
-0.2
+0.0
+0.2
-0.1
phage
WM_Bas09
-0.0
-0.0
-0.1
-0.3
+0.6
phage
WM_TP9
-0.1
+0.0
-0.1
+0.1
+0.5
carbon source
Casamino-acids
-0.0
-0.1
-0.1
+0.0
+0.5
phage
WM_Bas14
+0.2
+0.2
+0.1
-0.2
+0.1
phage
WM_RB68
+0.1
+0.0
+0.0
+0.3
-0.0
phage
Bas09
-0.2
-0.1
+0.0
-0.0
+0.9
carbon source
Casamino-acids
+0.1
-0.5
+0.2
+0.3
+0.6
phage
WM_Bas41
-0.1
-0.2
+0.1
+0.4
+0.6
phage
EV240
-0.2
-0.3
-0.4
+0.4
+1.3
phage
WM_EV240
-0.2
+0.2
-0.1
+0.8
+0.3
no phage control
Control_ECRC101_WM
+0.2
-0.0
+0.1
+0.0
+0.8
phage
Bas14
+0.0
-0.5
-0.0
+0.6
+1.1
phage
EV240
-0.2
-0.1
-0.0
+0.3
+1.3
phage
Bas14
-0.3
-0.1
-0.1
+0.2
+1.9
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