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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
sucA and sdhB are separated by 300 nucleotides
sdhB and sdhA are separated by 15 nucleotides
sdhA and sdhD overlap by 1 nucleotides
sdhD and sdhC overlap by 7 nucleotides
MCAODC_26145: sucA - 2-oxoglutarate dehydrogenase E1 component, at 1,942,645 to 1,945,446
sucA
MCAODC_26155: sdhB - succinate dehydrogenase iron-sulfur subunit SdhB, at 1,945,747 to 1,946,463
sdhB
MCAODC_26160: sdhA - succinate dehydrogenase flavoprotein subunit, at 1,946,479 to 1,948,245
sdhA
MCAODC_26165: sdhD - succinate dehydrogenase membrane anchor subunit, at 1,948,245 to 1,948,592
sdhD
MCAODC_26170: sdhC - succinate dehydrogenase cytochrome b556 subunit, at 1,948,586 to 1,948,990
sdhC
Group
Condition
MCAODC
_26145
MCAODC
_26155
MCAODC
_26160
MCAODC
_26165
MCAODC
_26170
sucA
sdhB
sdhA
sdhD
sdhC
carbon source
Casamino-acids
-4.2
-4.1
-4.1
-3.2
-6.2
carbon source
Casamino-acids
-3.2
-2.8
-3.9
-4.2
-2.0
carbon source
Sodium-DL-Lactate
-4.0
-1.7
-2.3
-1.6
-3.9
carbon source
Sodium-DL-Lactate
-2.7
-1.5
-2.8
-1.4
-1.6
phage
WM_Bas41
-2.0
-1.0
-0.6
-0.3
-2.0
carbon source
D-Glucose
-3.3
-0.5
-0.4
-0.1
-0.5
no phage control
Control_ECRC101_WM
-1.8
-1.3
-0.2
-0.1
-1.0
carbon source
D-Glucose
-4.3
-0.4
+0.1
+0.0
+0.4
carbon source
L-Arabinose
-4.3
-0.1
-0.0
+0.1
+0.4
no phage control
Control_ECRC101_WM
-2.6
-0.3
-0.3
-0.7
+0.1
phage
WM_TP9
-1.0
-0.9
-0.5
-0.6
-0.8
phage
WM_EV240
-1.2
-1.8
-0.5
-0.4
+0.4
phage
WM_TP9
-0.3
-0.7
-0.5
-0.5
-1.4
carbon source
L-Arabinose
-3.3
-0.4
-0.0
+0.4
+0.2
phage
WM_Bas09
-1.6
-0.5
-0.1
+0.0
-0.7
phage
WM_Bas09
-1.1
-0.1
-0.5
-0.1
-0.9
phage
Bas14
-1.0
-0.5
-0.9
-1.3
+1.3
phage
WM_Bas14
-1.1
-0.3
-0.5
+0.0
+0.0
phage
TP9
-0.9
-0.5
-0.4
-0.2
+0.2
phage
WM_RB68
-0.9
+0.1
-0.3
+0.0
-0.6
phage
Bas09
-0.3
-0.5
-0.7
-0.0
+0.3
phage
WM_EV240
+0.5
-1.3
-0.6
+0.1
-0.0
phage
Bas09
-0.3
-0.2
-0.1
+0.6
+0.9
phage
EV240
+0.3
-0.1
+0.4
+0.4
-0.1
phage
Bas14
+0.3
+0.5
-0.2
-0.0
+0.4
phage
EV240
+0.2
+0.5
+0.5
+0.5
+0.6
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