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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
sucC and odhB are separated by 93 nucleotides
odhB and sucA are separated by 14 nucleotides
sucA and sdhB are separated by 300 nucleotides
sdhB and sdhA are separated by 15 nucleotides
MCAODC_26135: sucC - ADP-forming succinate--CoA ligase subunit beta, at 1,940,153 to 1,941,319
sucC
MCAODC_26140: odhB - 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase, at 1,941,413 to 1,942,630
odhB
MCAODC_26145: sucA - 2-oxoglutarate dehydrogenase E1 component, at 1,942,645 to 1,945,446
sucA
MCAODC_26155: sdhB - succinate dehydrogenase iron-sulfur subunit SdhB, at 1,945,747 to 1,946,463
sdhB
MCAODC_26160: sdhA - succinate dehydrogenase flavoprotein subunit, at 1,946,479 to 1,948,245
sdhA
Group
Condition
MCAODC
_26135
MCAODC
_26140
MCAODC
_26145
MCAODC
_26155
MCAODC
_26160
sucC
odhB
sucA
sdhB
sdhA
carbon source
Casamino-acids
-4.0
-5.0
-4.2
-4.1
-4.1
carbon source
Casamino-acids
-3.6
-5.2
-3.2
-2.8
-3.9
carbon source
Sodium-DL-Lactate
-4.1
-5.1
-4.0
-1.7
-2.3
carbon source
Sodium-DL-Lactate
-2.8
-5.0
-2.7
-1.5
-2.8
carbon source
D-Glucose
-0.4
-5.0
-4.3
-0.4
+0.1
carbon source
L-Arabinose
-0.8
-5.0
-3.3
-0.4
-0.0
carbon source
D-Glucose
+0.2
-5.1
-3.3
-0.5
-0.4
phage
WM_EV240
+0.0
-3.8
-1.2
-1.8
-0.5
no phage control
Control_ECRC101_WM
-0.0
-3.0
-1.8
-1.3
-0.2
phage
WM_TP9
-0.0
-3.5
-1.0
-0.9
-0.5
carbon source
L-Arabinose
-0.3
-1.0
-4.3
-0.1
-0.0
phage
Bas14
-1.2
-1.9
-1.0
-0.5
-0.9
no phage control
Control_ECRC101_WM
+0.5
-2.9
-2.6
-0.3
-0.3
phage
WM_Bas41
-0.6
-1.2
-2.0
-1.0
-0.6
phage
Bas09
-1.1
-1.4
-0.3
-0.5
-0.7
phage
WM_Bas14
+0.1
-2.1
-1.1
-0.3
-0.5
phage
WM_Bas09
+0.3
-1.6
-1.6
-0.5
-0.1
phage
TP9
-0.4
-1.3
-0.9
-0.5
-0.4
phage
WM_Bas09
-0.0
-1.7
-1.1
-0.1
-0.5
phage
WM_TP9
-0.1
-0.8
-0.3
-0.7
-0.5
phage
WM_RB68
+0.4
-1.0
-0.9
+0.1
-0.3
phage
Bas09
-0.4
-0.2
-0.3
-0.2
-0.1
phage
WM_EV240
-0.3
+0.9
+0.5
-1.3
-0.6
phage
Bas14
-0.8
-0.3
+0.3
+0.5
-0.2
phage
EV240
-0.3
-0.9
+0.2
+0.5
+0.5
phage
EV240
-0.6
+0.1
+0.3
-0.1
+0.4
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