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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
yliI and bssR are separated by 110 nucleotides
bssR and rimO are separated by 212 nucleotides
rimO and MCAODC_25280 are separated by 225 nucleotides
MCAODC_25280 and yiaG overlap by 11 nucleotides
MCAODC_25265: yliI - aldose sugar dehydrogenase YliI, at 1,775,560 to 1,776,675
yliI
MCAODC_25270: bssR - biofilm formation regulator BssR, at 1,776,786 to 1,777,169
bssR
MCAODC_25275: rimO - 30S ribosomal protein S12 methylthiotransferase RimO, at 1,777,382 to 1,778,707
rimO
MCAODC_25280: MCAODC_25280 - addiction module toxin RelE, at 1,778,933 to 1,779,319
_25280
MCAODC_25285: yiaG - transcriptional regulator, at 1,779,309 to 1,779,638
yiaG
Group
Condition
MCAODC
_25265
MCAODC
_25270
MCAODC
_25275
MCAODC
_25280
MCAODC
_25285
yliI
bssR
rimO
yiaG
phage
WM_EV240
-0.3
-0.1
-0.5
-0.6
-1.4
phage
Bas09
-0.0
-0.4
-0.3
-0.4
-0.7
phage
Bas09
+0.1
-0.1
-0.5
-0.5
-0.8
no phage control
Control_ECRC101_WM
+0.1
+0.1
-0.0
-0.4
-1.1
phage
EV240
+0.3
-0.3
-0.1
-1.7
+0.4
phage
TP9
-0.2
-0.0
+0.1
-1.0
-0.0
carbon source
Sodium-DL-Lactate
-0.0
-0.5
-0.3
+0.1
-0.2
phage
WM_Bas09
+0.1
+0.2
-0.1
-0.6
-0.4
phage
Bas14
-0.0
-0.2
-0.8
-0.0
+0.2
carbon source
L-Arabinose
-0.1
-0.2
+0.4
+0.0
-0.6
carbon source
Casamino-acids
-0.3
-0.4
-0.2
-0.1
+0.5
phage
EV240
-0.0
-0.4
-0.4
-0.0
+0.5
phage
WM_TP9
+0.0
-0.2
-0.2
+0.2
-0.1
phage
Bas14
+0.3
-0.9
-0.4
+0.5
+0.3
phage
WM_RB68
+0.1
-0.4
-0.1
+0.2
-0.1
phage
WM_TP9
+0.2
+0.1
+0.4
-0.6
-0.2
no phage control
Control_ECRC101_WM
-0.1
+0.1
+0.1
+0.1
-0.4
phage
WM_EV240
-0.1
+0.1
-0.2
-0.1
+0.4
phage
WM_Bas09
-0.0
-0.0
-0.0
+0.6
-0.5
phage
WM_Bas41
+0.0
-0.0
+0.0
+0.1
+0.1
carbon source
D-Glucose
-0.2
-0.3
+0.4
+0.5
+0.1
carbon source
Sodium-DL-Lactate
-0.0
+0.3
-0.1
+0.2
+0.1
carbon source
Casamino-acids
-0.3
+0.2
+0.3
-0.1
+0.6
phage
WM_Bas14
+0.1
-0.1
+0.4
+0.4
-0.1
carbon source
L-Arabinose
-0.1
+0.1
-0.2
+0.9
+0.5
carbon source
D-Glucose
+0.1
+0.8
-0.0
+0.5
+0.1
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