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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
ybjN and rimK are separated by 87 nucleotides
rimK and nfsA are separated by 60 nucleotides
nfsA and MCAODC_25195 overlap by 17 nucleotides
MCAODC_25195 and grxA are separated by 159 nucleotides
MCAODC_25180: ybjN - Uncharacterized protein YbjN, at 1,761,985 to 1,762,461
ybjN
MCAODC_25185: rimK - 30S ribosomal protein S6--L-glutamate ligase, at 1,762,549 to 1,763,451
rimK
MCAODC_25190: nfsA - nitroreductase NfsA, at 1,763,512 to 1,764,234
nfsA
MCAODC_25195: MCAODC_25195 - DUF1418 domain-containing protein, at 1,764,218 to 1,764,505
_25195
MCAODC_25200: grxA - glutaredoxin 1, at 1,764,665 to 1,764,922
grxA
Group
Condition
MCAODC
_25180
MCAODC
_25185
MCAODC
_25190
MCAODC
_25195
MCAODC
_25200
ybjN
rimK
nfsA
grxA
phage
WM_EV240
-3.3
-0.6
-0.1
-4.0
-0.2
carbon source
Casamino-acids
-2.1
+0.0
-0.4
-1.9
-0.1
phage
WM_RB68
-1.9
-0.1
+0.1
-2.0
+0.1
phage
TP9
+0.1
-0.1
+0.0
-3.2
-0.6
phage
WM_EV240
-2.8
+0.4
-0.0
-0.7
-0.4
phage
EV240
-2.2
+0.5
+0.1
-1.5
+0.1
phage
WM_TP9
-1.3
+0.3
-0.0
-1.6
-0.1
carbon source
Casamino-acids
-3.3
+0.0
+0.1
+0.3
+0.3
carbon source
L-Arabinose
-1.1
-0.3
-0.1
+0.2
-0.4
phage
Bas09
-0.0
+0.0
+0.2
-1.6
-0.2
no phage control
Control_ECRC101_WM
-0.5
+0.0
-0.3
-0.4
+0.2
phage
WM_Bas09
-0.7
+0.1
-0.1
-0.1
-0.1
phage
WM_Bas41
+0.4
-0.2
-0.8
-0.6
+0.5
carbon source
Sodium-DL-Lactate
+0.4
-0.0
-0.0
-0.9
-0.0
phage
Bas14
-0.1
-0.3
-0.3
+0.5
-0.1
phage
Bas09
-0.1
-0.1
+0.2
+0.3
-0.2
phage
WM_TP9
-0.2
+0.1
-0.2
+0.5
+0.0
phage
EV240
-0.2
-0.3
-0.0
+1.0
-0.1
no phage control
Control_ECRC101_WM
-0.2
+0.1
-0.1
+0.6
-0.1
carbon source
D-Glucose
-1.5
+0.0
-0.1
+2.0
+0.1
carbon source
Sodium-DL-Lactate
+0.1
+0.3
-0.2
-0.1
+0.3
carbon source
D-Glucose
-0.7
+0.2
+0.1
+1.3
-0.3
carbon source
L-Arabinose
+0.0
-0.1
-0.0
+0.8
-0.1
phage
Bas14
-0.0
-0.2
+0.0
+1.2
-0.1
phage
WM_Bas14
+0.4
+0.0
-0.2
+0.4
+0.3
phage
WM_Bas09
-0.3
+0.3
-0.3
+1.3
+0.0
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