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Protein
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Fitness for 5 genes in
Escherichia coli ECRC101
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500 nt
cmoM and elyC are separated by 135 nucleotides
elyC and ycbJ overlap by 24 nucleotides
ycbJ and kdsB are separated by 153 nucleotides
kdsB and ycaR overlap by 4 nucleotides
MCAODC_24810: cmoM - tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM, at 1,676,748 to 1,677,533
cmoM
MCAODC_24815: elyC - envelope biogenesis factor ElyC, at 1,677,669 to 1,678,448
elyC
MCAODC_24820: ycbJ - Uncharacterized protein YcbJ, at 1,678,425 to 1,679,318
ycbJ
MCAODC_24825: kdsB - 3-deoxy-manno-octulosonate cytidylyltransferase, at 1,679,472 to 1,680,218
kdsB
MCAODC_24830: ycaR - protein YcaR, at 1,680,215 to 1,680,397
ycaR
Group
Condition
MCAODC
_24810
MCAODC
_24815
MCAODC
_24820
MCAODC
_24825
MCAODC
_24830
cmoM
elyC
ycbJ
kdsB
ycaR
phage
Bas14
-0.6
-0.2
-0.3
N.D.
N.D.
phage
WM_EV240
-0.4
-0.2
-0.1
N.D.
N.D.
carbon source
L-Arabinose
-0.3
-0.2
-0.0
N.D.
N.D.
phage
EV240
-0.2
+0.1
-0.4
N.D.
N.D.
carbon source
Sodium-DL-Lactate
-0.2
-0.2
-0.1
N.D.
N.D.
phage
WM_Bas41
-0.4
-0.0
+0.1
N.D.
N.D.
phage
Bas09
-0.5
-0.0
+0.3
N.D.
N.D.
no phage control
Control_ECRC101_WM
-0.3
+0.2
+0.0
N.D.
N.D.
carbon source
L-Arabinose
+0.1
+0.1
-0.2
N.D.
N.D.
carbon source
D-Glucose
+0.1
-0.1
-0.0
N.D.
N.D.
carbon source
Sodium-DL-Lactate
-0.2
-0.1
+0.3
N.D.
N.D.
carbon source
D-Glucose
+0.0
+0.2
-0.2
N.D.
N.D.
phage
EV240
-0.2
+0.3
+0.1
N.D.
N.D.
phage
WM_TP9
+0.0
+0.1
-0.0
N.D.
N.D.
phage
TP9
-0.3
+0.4
+0.1
N.D.
N.D.
phage
WM_TP9
-0.4
+0.4
+0.3
N.D.
N.D.
phage
WM_EV240
-0.0
+0.0
+0.3
N.D.
N.D.
carbon source
Casamino-acids
-0.2
+0.3
+0.2
N.D.
N.D.
phage
WM_RB68
-0.1
+0.3
+0.2
N.D.
N.D.
phage
WM_Bas09
+0.4
+0.0
-0.1
N.D.
N.D.
no phage control
Control_ECRC101_WM
+0.1
+0.1
+0.2
N.D.
N.D.
phage
Bas14
-0.3
+0.1
+0.6
N.D.
N.D.
phage
WM_Bas14
+0.2
+0.2
+0.2
N.D.
N.D.
phage
Bas09
+0.2
+0.4
+0.2
N.D.
N.D.
phage
WM_Bas09
+0.0
+0.4
+0.4
N.D.
N.D.
carbon source
Casamino-acids
+0.5
+0.1
+0.4
N.D.
N.D.
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