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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
mukE and mukF overlap by 20 nucleotides
mukF and cmoM overlap by 4 nucleotides
cmoM and elyC are separated by 135 nucleotides
elyC and ycbJ overlap by 24 nucleotides
MCAODC_24800: mukE - chromosome partition protein MukE, at 1,674,744 to 1,675,448
mukE
MCAODC_24805: mukF - chromosome partition protein MukF, at 1,675,429 to 1,676,751
mukF
MCAODC_24810: cmoM - tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM, at 1,676,748 to 1,677,533
cmoM
MCAODC_24815: elyC - envelope biogenesis factor ElyC, at 1,677,669 to 1,678,448
elyC
MCAODC_24820: ycbJ - Uncharacterized protein YcbJ, at 1,678,425 to 1,679,318
ycbJ
Group
Condition
MCAODC
_24800
MCAODC
_24805
MCAODC
_24810
MCAODC
_24815
MCAODC
_24820
mukE
mukF
cmoM
elyC
ycbJ
phage
Bas14
N.D.
N.D.
-0.6
-0.2
-0.3
phage
WM_EV240
N.D.
N.D.
-0.4
-0.2
-0.1
carbon source
L-Arabinose
N.D.
N.D.
-0.3
-0.2
-0.0
phage
EV240
N.D.
N.D.
-0.2
+0.1
-0.4
carbon source
Sodium-DL-Lactate
N.D.
N.D.
-0.2
-0.2
-0.1
phage
WM_Bas41
N.D.
N.D.
-0.4
-0.0
+0.1
phage
Bas09
N.D.
N.D.
-0.5
-0.0
+0.3
no phage control
Control_ECRC101_WM
N.D.
N.D.
-0.3
+0.2
+0.0
carbon source
L-Arabinose
N.D.
N.D.
+0.1
+0.1
-0.2
carbon source
D-Glucose
N.D.
N.D.
+0.1
-0.1
-0.0
carbon source
Sodium-DL-Lactate
N.D.
N.D.
-0.2
-0.1
+0.3
carbon source
D-Glucose
N.D.
N.D.
+0.0
+0.2
-0.2
phage
EV240
N.D.
N.D.
-0.2
+0.3
+0.1
phage
WM_TP9
N.D.
N.D.
+0.0
+0.1
-0.0
phage
TP9
N.D.
N.D.
-0.3
+0.4
+0.1
phage
WM_TP9
N.D.
N.D.
-0.4
+0.4
+0.3
phage
WM_EV240
N.D.
N.D.
-0.0
+0.0
+0.3
carbon source
Casamino-acids
N.D.
N.D.
-0.2
+0.3
+0.2
phage
WM_RB68
N.D.
N.D.
-0.1
+0.3
+0.2
phage
WM_Bas09
N.D.
N.D.
+0.4
+0.0
-0.1
no phage control
Control_ECRC101_WM
N.D.
N.D.
+0.1
+0.1
+0.2
phage
Bas14
N.D.
N.D.
-0.3
+0.1
+0.6
phage
WM_Bas14
N.D.
N.D.
+0.2
+0.2
+0.2
phage
Bas09
N.D.
N.D.
+0.2
+0.4
+0.2
phage
WM_Bas09
N.D.
N.D.
+0.0
+0.4
+0.4
carbon source
Casamino-acids
N.D.
N.D.
+0.5
+0.1
+0.4
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