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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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500 nt
MCAODC_24690 and fimA are separated by 13 nucleotides
fimA and ycbU overlap by 41 nucleotides
ycbU and elfG are separated by 168 nucleotides
elfG and fimD overlap by 10 nucleotides
MCAODC_24690: MCAODC_24690 - PapD-N domain-containing protein, at 1,646,751 to 1,647,272
_24690
MCAODC_24695: fimA - fimbrial protein, at 1,647,286 to 1,647,849
fimA
MCAODC_24700: ycbU - Uncharacterized fimbrial-like protein YcbU, at 1,647,809 to 1,648,285
ycbU
MCAODC_24705: elfG - Uncharacterized fimbrial-like protein ElfG, at 1,648,454 to 1,649,434
elfG
MCAODC_24710: fimD - fimbrial biogenesis usher protein, at 1,649,425 to 1,651,386
fimD
Group
Condition
MCAODC
_24690
MCAODC
_24695
MCAODC
_24700
MCAODC
_24705
MCAODC
_24710
fimA
ycbU
elfG
fimD
phage
TP9
-0.1
-0.3
-0.6
-0.4
-0.1
phage
EV240
-0.3
-0.2
-0.3
-0.5
-0.1
phage
Bas14
-0.1
-0.4
-0.6
-0.1
-0.1
phage
EV240
-0.1
-0.6
-0.4
-0.0
-0.1
carbon source
L-Arabinose
-0.0
-0.6
-0.4
-0.0
+0.1
phage
Bas09
-0.2
-0.4
-0.3
+0.1
-0.1
phage
Bas14
-0.1
-0.3
-0.2
-0.0
-0.1
phage
Bas09
-0.2
+0.1
-0.4
-0.1
-0.1
carbon source
Sodium-DL-Lactate
-0.1
-0.6
-0.1
+0.2
-0.0
carbon source
Sodium-DL-Lactate
+0.2
-0.2
-0.5
-0.1
-0.0
carbon source
D-Glucose
-0.0
-0.5
+0.1
-0.0
+0.1
carbon source
D-Glucose
+0.1
-0.5
-0.1
-0.1
+0.2
carbon source
Casamino-acids
+0.0
-0.1
-0.3
+0.2
-0.0
phage
WM_Bas09
+0.1
-0.4
-0.1
+0.3
+0.0
phage
WM_TP9
+0.1
-0.3
+0.2
+0.0
-0.1
phage
WM_TP9
-0.1
-0.2
+0.2
+0.1
-0.1
no phage control
Control_ECRC101_WM
-0.5
-0.1
+0.6
-0.0
+0.0
phage
WM_Bas41
+0.2
-0.2
+0.2
-0.1
-0.1
no phage control
Control_ECRC101_WM
+0.3
-0.1
+0.0
+0.0
-0.1
carbon source
Casamino-acids
-0.2
+0.5
+0.2
-0.1
+0.0
phage
WM_RB68
+0.0
-0.0
+0.0
+0.3
+0.1
phage
WM_EV240
+0.7
-0.1
+0.6
-0.4
-0.2
carbon source
L-Arabinose
+0.3
+0.0
+0.1
+0.1
+0.2
phage
WM_EV240
+0.1
+0.3
-0.0
+0.4
+0.0
phage
WM_Bas09
+0.3
-0.0
+0.4
+0.0
+0.1
phage
WM_Bas14
+0.1
+0.1
+0.8
+0.0
+0.0
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