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Fitness for 5 genes in
Escherichia coli ECRC101
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500 nt
fabA and rmf are separated by 69 nucleotides
rmf and pqiC are separated by 255 nucleotides
pqiC and pqiB overlap by 4 nucleotides
pqiB and pqiA are separated by 4 nucleotides
MCAODC_24640: fabA - bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase, at 1,634,663 to 1,635,289
fabA
MCAODC_24645: rmf - ribosome modulation factor, at 1,635,359 to 1,635,526
rmf
MCAODC_24650: pqiC - membrane integrity-associated transporter subunit PqiC, at 1,635,782 to 1,636,345
pqiC
MCAODC_24655: pqiB - intermembrane transport protein PqiB, at 1,636,342 to 1,637,982
pqiB
MCAODC_24660: pqiA - membrane integrity-associated transporter subunit PqiA, at 1,637,987 to 1,639,240
pqiA
Group
Condition
MCAODC
_24640
MCAODC
_24645
MCAODC
_24650
MCAODC
_24655
MCAODC
_24660
fabA
rmf
pqiC
pqiB
pqiA
phage
Bas14
N.D.
N.D.
-0.5
-0.1
-0.3
phage
EV240
N.D.
N.D.
-0.1
-0.5
-0.3
carbon source
L-Arabinose
N.D.
N.D.
-0.9
+0.2
-0.2
carbon source
Casamino-acids
N.D.
N.D.
+0.3
-0.7
-0.2
phage
Bas14
N.D.
N.D.
-0.6
-0.2
+0.3
phage
WM_RB68
N.D.
N.D.
-0.1
-0.3
+0.2
no phage control
Control_ECRC101_WM
N.D.
N.D.
-0.0
-0.3
+0.1
no phage control
Control_ECRC101_WM
N.D.
N.D.
+0.1
-0.3
+0.1
phage
WM_Bas41
N.D.
N.D.
+0.2
-0.2
-0.1
phage
WM_TP9
N.D.
N.D.
-0.3
+0.1
+0.2
phage
WM_Bas14
N.D.
N.D.
+0.1
-0.4
+0.3
phage
WM_TP9
N.D.
N.D.
-0.1
+0.0
+0.2
phage
Bas09
N.D.
N.D.
+0.8
-0.6
-0.1
carbon source
Sodium-DL-Lactate
N.D.
N.D.
+0.2
+0.4
-0.3
carbon source
Casamino-acids
N.D.
N.D.
+0.5
-0.0
+0.0
phage
WM_EV240
N.D.
N.D.
+0.6
+0.2
-0.3
phage
WM_Bas09
N.D.
N.D.
+0.4
+0.1
-0.0
phage
EV240
N.D.
N.D.
+0.5
-0.1
+0.2
carbon source
D-Glucose
N.D.
N.D.
+0.2
+0.3
+0.1
carbon source
Sodium-DL-Lactate
N.D.
N.D.
+0.1
+0.3
+0.2
carbon source
D-Glucose
N.D.
N.D.
+0.1
+0.6
+0.0
phage
TP9
N.D.
N.D.
+0.7
+0.0
-0.0
phage
WM_EV240
N.D.
N.D.
+0.4
+0.3
+0.1
phage
WM_Bas09
N.D.
N.D.
+0.4
+0.1
+0.4
phage
Bas09
N.D.
N.D.
+1.0
+0.1
+0.0
carbon source
L-Arabinose
N.D.
N.D.
+0.6
+0.5
+0.3
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