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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
yccF and yccS are separated by 9 nucleotides
yccS and sxy overlap by 38 nucleotides
sxy and sulA are separated by 218 nucleotides
sulA and ompA are separated by 356 nucleotides
MCAODC_24605: yccF - YccF domain-containing protein, at 1,626,894 to 1,627,340
yccF
MCAODC_24610: yccS - Inner membrane protein YccS, at 1,627,350 to 1,629,512
yccS
MCAODC_24615: sxy - CRP-S regulon transcriptional coactivator Sxy, at 1,629,475 to 1,630,104
sxy
MCAODC_24620: sulA - cell division inhibitor SulA, at 1,630,323 to 1,630,832
sulA
MCAODC_24625: ompA - outer membrane protein A, at 1,631,189 to 1,632,229
ompA
Group
Condition
MCAODC
_24605
MCAODC
_24610
MCAODC
_24615
MCAODC
_24620
MCAODC
_24625
yccF
yccS
sxy
sulA
ompA
carbon source
L-Arabinose
+0.0
+0.0
-0.2
-0.5
-3.9
carbon source
L-Arabinose
-0.0
-0.0
+0.0
-0.4
-3.1
carbon source
Sodium-DL-Lactate
-0.1
-0.1
+0.0
-0.2
-1.9
carbon source
D-Glucose
-0.6
-0.1
+0.0
-0.4
-0.6
carbon source
D-Glucose
-0.1
+0.0
+0.2
-0.2
-1.5
carbon source
Sodium-DL-Lactate
+0.1
-0.0
+0.1
-0.0
-1.4
phage
TP9
-0.4
-0.1
+0.3
-0.2
-0.8
carbon source
Casamino-acids
-0.1
-0.3
+0.0
-0.2
-0.6
phage
Bas14
+0.0
+0.3
-0.1
-0.3
-0.9
phage
WM_Bas09
-0.5
-0.0
-0.2
+0.0
-0.2
carbon source
Casamino-acids
+0.0
-0.1
-0.0
-0.1
-0.4
no phage control
Control_ECRC101_WM
-0.5
-0.0
+0.0
-0.0
+0.1
phage
Bas14
+0.2
+0.2
-0.3
+0.1
-0.6
phage
WM_TP9
-0.1
+0.1
-0.1
-0.2
+0.0
phage
WM_TP9
+0.1
-0.2
-0.1
+0.1
-0.1
phage
Bas09
-0.0
+0.1
-0.0
+0.3
-0.4
phage
WM_Bas14
+0.2
+0.0
-0.1
-0.0
+0.1
phage
WM_Bas41
+0.1
-0.3
+0.1
-0.1
+0.4
phage
WM_RB68
+0.1
-0.1
-0.0
+0.1
+0.3
no phage control
Control_ECRC101_WM
+0.0
-0.1
+0.3
+0.4
-0.1
phage
Bas09
+0.3
+0.2
+0.1
+0.0
-0.1
phage
WM_Bas09
+0.3
+0.0
+0.1
+0.2
+0.1
phage
WM_EV240
+0.1
+0.1
+0.0
+0.3
+1.8
phage
WM_EV240
+0.4
-0.1
-0.1
+0.1
+2.3
phage
EV240
-0.1
-0.1
-0.1
+0.7
+3.9
phage
EV240
-0.2
+0.1
+0.2
+0.7
+3.8
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