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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
torA and torC overlap by 1 nucleotides
torC and torR are separated by 129 nucleotides
torR and torT overlap by 28 nucleotides
torT and torS are separated by 127 nucleotides
MCAODC_24085: torA - trimethylamine-N-oxide reductase TorA, at 1,540,192 to 1,542,738
torA
MCAODC_24090: torC - pentaheme c-type cytochrome TorC, at 1,542,738 to 1,543,910
torC
MCAODC_24095: torR - two-component system response regulator TorR, at 1,544,040 to 1,544,732
torR
MCAODC_24100: torT - TMAO reductase system periplasmic protein TorT, at 1,544,705 to 1,545,733
torT
MCAODC_24105: torS - TMAO reductase system sensor histidine kinase/response regulator TorS, at 1,545,861 to 1,548,560
torS
Group
Condition
MCAODC
_24085
MCAODC
_24090
MCAODC
_24095
MCAODC
_24100
MCAODC
_24105
torA
torC
torR
torT
torS
phage
WM_EV240
+0.0
-0.7
-0.8
-0.0
-0.4
phage
WM_Bas41
-0.2
-0.3
-0.6
-0.2
+0.2
phage
EV240
+0.1
+0.2
-0.6
-0.1
-0.5
phage
WM_EV240
-0.4
+0.1
-0.0
-0.3
-0.1
phage
WM_TP9
+0.0
-0.3
-0.2
-0.0
-0.2
phage
WM_Bas09
-0.0
-0.1
-0.3
-0.2
+0.0
carbon source
D-Glucose
+0.0
-0.0
-0.1
-0.2
+0.1
phage
WM_Bas14
-0.1
-0.0
+0.1
-0.1
-0.0
phage
WM_TP9
+0.1
-0.1
+0.2
-0.2
-0.1
no phage control
Control_ECRC101_WM
-0.1
+0.2
-0.0
-0.1
-0.1
carbon source
Casamino-acids
+0.0
-0.1
-0.1
+0.2
-0.0
carbon source
L-Arabinose
+0.3
+0.1
-0.1
-0.2
-0.0
phage
Bas09
+0.4
-0.2
+0.4
-0.5
-0.1
carbon source
Casamino-acids
-0.1
-0.2
+0.3
+0.0
+0.0
carbon source
Sodium-DL-Lactate
+0.0
-0.0
+0.1
-0.0
+0.1
phage
WM_Bas09
+0.0
-0.1
+0.6
-0.3
-0.1
carbon source
D-Glucose
+0.1
+0.2
+0.0
-0.1
+0.1
carbon source
L-Arabinose
+0.0
+0.0
+0.2
-0.1
+0.1
phage
WM_RB68
-0.0
-0.2
+0.2
+0.2
+0.1
no phage control
Control_ECRC101_WM
-0.1
-0.1
+0.4
+0.1
+0.1
carbon source
Sodium-DL-Lactate
+0.1
+0.1
+0.3
-0.4
+0.3
phage
TP9
+0.3
-0.1
+0.2
+0.4
-0.1
phage
Bas14
+0.3
+0.3
+0.2
+0.3
-0.2
phage
EV240
+0.1
+0.2
+0.5
+0.1
-0.1
phage
Bas09
+0.4
-0.1
+0.5
+0.4
-0.2
phage
Bas14
+0.1
+0.3
+0.6
+0.3
-0.2
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