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Protein
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Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
wrbA and yccJ are separated by 20 nucleotides
yccJ and agp are separated by 37 nucleotides
agp and MCAODC_24055 are separated by 290 nucleotides
MCAODC_24055 and MCAODC_24060 are separated by 109 nucleotides
MCAODC_24040: wrbA - NAD(P)H:quinone oxidoreductase, at 1,534,286 to 1,534,882
wrbA
MCAODC_24045: yccJ - Uncharacterized protein YccJ, at 1,534,903 to 1,535,130
yccJ
MCAODC_24050: agp - bifunctional glucose-1-phosphatase/inositol phosphatase, at 1,535,168 to 1,536,409
agp
MCAODC_24055: MCAODC_24055 - YccE, at 1,536,700 to 1,536,948
_24055
MCAODC_24060: MCAODC_24060 - YccE, at 1,537,058 to 1,537,957
_24060
Group
Condition
MCAODC
_24040
MCAODC
_24045
MCAODC
_24050
MCAODC
_24055
MCAODC
_24060
wrbA
yccJ
agp
carbon source
L-Arabinose
+0.3
N.D.
-0.0
-1.5
-5.1
phage
EV240
-1.2
N.D.
-0.1
-1.8
-3.1
carbon source
Sodium-DL-Lactate
-0.7
N.D.
+0.0
-3.6
-1.8
carbon source
L-Arabinose
-0.5
N.D.
+0.1
-2.7
-0.7
phage
WM_Bas41
-0.2
N.D.
-0.3
-1.5
-1.4
phage
TP9
-0.4
N.D.
-0.0
-1.2
-1.4
phage
EV240
-0.4
N.D.
+0.0
-1.3
-0.8
carbon source
D-Glucose
-0.0
N.D.
+0.0
-2.1
-0.3
carbon source
Sodium-DL-Lactate
-0.7
N.D.
+0.0
-2.7
+1.0
phage
WM_EV240
+0.4
N.D.
-0.4
-2.6
+0.4
phage
WM_EV240
-0.6
N.D.
-0.2
-0.1
-1.1
phage
Bas09
-0.0
N.D.
+0.1
-0.7
-1.5
carbon source
D-Glucose
+0.0
N.D.
+0.0
-2.2
+0.5
phage
Bas14
-0.4
N.D.
-0.2
-0.5
-0.6
phage
WM_TP9
+0.1
N.D.
-0.1
-0.6
-0.8
phage
WM_Bas09
+0.9
N.D.
-0.1
-0.6
-1.7
phage
WM_RB68
+0.4
N.D.
+0.0
-0.8
-0.6
phage
WM_TP9
+0.4
N.D.
-0.2
-0.0
-1.1
phage
WM_Bas09
-1.0
N.D.
-0.0
-0.0
+0.3
carbon source
Casamino-acids
-0.2
N.D.
+0.0
-0.4
+0.0
phage
Bas14
-0.9
N.D.
+0.1
+0.7
-0.3
phage
Bas09
-0.3
N.D.
+0.2
-0.1
-0.1
no phage control
Control_ECRC101_WM
+0.3
N.D.
-0.1
-0.7
+0.3
phage
WM_Bas14
-0.7
N.D.
-0.3
-0.0
+0.8
no phage control
Control_ECRC101_WM
+0.3
N.D.
-0.2
-0.0
+1.1
carbon source
Casamino-acids
+1.5
N.D.
+0.1
-0.2
+0.9
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