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Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
MCAODC_23910 and MCAODC_23915 overlap by 4 nucleotides
MCAODC_23915 and pgaA are separated by 586 nucleotides
pgaA and pgaA are separated by 153 nucleotides
pgaA and pgaB are separated by 8 nucleotides
MCAODC_23910: MCAODC_23910 - GGDEF domain-containing protein, at 1,505,918 to 1,506,334
_23910
MCAODC_23915: MCAODC_23915 - Putative diguanylate cyclase, at 1,506,331 to 1,507,275
_23915
MCAODC_23920: pgaA - poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA, at 1,507,862 to 1,509,619
pgaA
MCAODC_23925: pgaA - poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA, at 1,509,773 to 1,510,285
pgaA
MCAODC_23930: pgaB - poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, at 1,510,294 to 1,512,312
pgaB
Group
Condition
MCAODC
_23910
MCAODC
_23915
MCAODC
_23920
MCAODC
_23925
MCAODC
_23930
pgaA
pgaA
pgaB
carbon source
L-Arabinose
-1.7
N.D.
-0.0
+0.0
-0.1
phage
TP9
-1.6
N.D.
+0.4
-0.2
-0.2
carbon source
Sodium-DL-Lactate
-1.1
N.D.
+0.1
-0.2
-0.2
phage
Bas14
-0.1
N.D.
-0.7
-0.2
-0.3
carbon source
L-Arabinose
-1.9
N.D.
+0.2
+0.5
+0.0
phage
WM_Bas09
-1.3
N.D.
+0.1
+0.3
-0.2
phage
Bas14
+0.1
N.D.
-0.0
-0.5
-0.6
phage
Bas09
+0.1
N.D.
-0.1
-1.1
+0.1
phage
WM_RB68
-1.0
N.D.
-0.0
-0.1
+0.0
carbon source
Sodium-DL-Lactate
-1.3
N.D.
+0.2
-0.1
+0.2
carbon source
D-Glucose
-1.4
N.D.
+0.2
+0.2
+0.2
phage
WM_EV240
-0.8
N.D.
+0.3
-0.4
+0.1
no phage control
Control_ECRC101_WM
-0.7
N.D.
-0.0
-0.1
+0.1
phage
WM_Bas09
-0.4
N.D.
-0.2
-0.5
+0.3
carbon source
D-Glucose
-0.4
N.D.
-0.3
-0.1
+0.2
phage
WM_Bas14
-0.7
N.D.
+0.2
-0.3
+0.3
phage
WM_TP9
-0.6
N.D.
-0.2
-0.3
+0.6
carbon source
Casamino-acids
+0.3
N.D.
-0.3
-0.8
+0.3
phage
EV240
-0.8
N.D.
-0.1
+0.4
+0.4
phage
WM_TP9
-0.4
N.D.
+0.2
-0.3
+0.5
phage
WM_EV240
-0.0
N.D.
+0.0
+0.1
-0.0
phage
EV240
+0.4
N.D.
+0.0
+0.4
-0.7
no phage control
Control_ECRC101_WM
-0.0
N.D.
-0.2
-0.1
+0.5
phage
Bas09
+0.7
N.D.
+0.0
-0.3
+0.2
phage
WM_Bas41
+0.1
N.D.
+0.1
+0.5
-0.0
carbon source
Casamino-acids
+0.1
N.D.
-0.0
+0.3
+0.5
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