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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
MCAODC_23730 and MCAODC_23735 overlap by 35 nucleotides
MCAODC_23735 and MCAODC_23740 are separated by 840 nucleotides
MCAODC_23740 and MCAODC_23745 are separated by 2050 nucleotides
MCAODC_23745 and fimB are separated by 186 nucleotides
MCAODC_23730: MCAODC_23730 - IS3 family transposase, at 1,462,735 to 1,463,622
_23730
MCAODC_23735: MCAODC_23735 - AMP nucleosidase, at 1,463,588 to 1,463,677
_23735
MCAODC_23740: MCAODC_23740 - DUF3987 domain-containing protein, at 1,464,518 to 1,465,903
_23740
MCAODC_23745: MCAODC_23745 - Membrane protein, at 1,467,954 to 1,469,771
_23745
MCAODC_23750: fimB - integrase, at 1,469,958 to 1,471,160
fimB
Group
Condition
MCAODC
_23730
MCAODC
_23735
MCAODC
_23740
MCAODC
_23745
MCAODC
_23750
fimB
phage
WM_Bas41
N.D.
N.D.
-0.4
-0.5
-0.5
no phage control
Control_ECRC101_WM
N.D.
N.D.
-0.2
-0.7
-0.0
carbon source
L-Arabinose
N.D.
N.D.
-0.3
-0.5
+0.1
carbon source
Sodium-DL-Lactate
N.D.
N.D.
-0.3
-0.4
+0.0
phage
TP9
N.D.
N.D.
-0.0
-0.5
-0.1
carbon source
D-Glucose
N.D.
N.D.
+0.1
-0.7
+0.0
phage
WM_Bas09
N.D.
N.D.
-0.4
-0.3
+0.2
phage
WM_Bas14
N.D.
N.D.
+0.2
-0.7
-0.0
phage
WM_EV240
N.D.
N.D.
+0.2
-0.6
-0.0
phage
EV240
N.D.
N.D.
-0.0
-0.1
-0.3
phage
Bas14
N.D.
N.D.
-0.2
-0.3
+0.2
phage
WM_TP9
N.D.
N.D.
+0.1
-0.3
+0.0
carbon source
L-Arabinose
N.D.
N.D.
-0.2
-0.1
+0.1
phage
WM_RB68
N.D.
N.D.
+0.0
-0.1
-0.0
carbon source
Casamino-acids
N.D.
N.D.
-0.5
+0.2
+0.2
carbon source
D-Glucose
N.D.
N.D.
+0.7
-0.9
+0.3
no phage control
Control_ECRC101_WM
N.D.
N.D.
+0.0
+0.0
+0.0
phage
Bas14
N.D.
N.D.
-0.2
+0.5
-0.1
phage
EV240
N.D.
N.D.
-0.2
+0.3
+0.1
carbon source
Sodium-DL-Lactate
N.D.
N.D.
+0.4
-0.2
-0.0
carbon source
Casamino-acids
N.D.
N.D.
+0.1
+0.0
+0.2
phage
WM_TP9
N.D.
N.D.
+0.2
+0.3
-0.0
phage
Bas09
N.D.
N.D.
+0.5
-0.0
+0.1
phage
Bas09
N.D.
N.D.
+0.3
+0.9
-0.2
phage
WM_Bas09
N.D.
N.D.
+0.7
-0.2
+0.5
phage
WM_EV240
N.D.
N.D.
+0.7
+0.6
+0.2
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