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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
MCAODC_23550 and MCAODC_23555 are separated by 3 nucleotides
MCAODC_23555 and tnpB are separated by 30 nucleotides
tnpB and MCAODC_23565 overlap by 4 nucleotides
MCAODC_23565 and MCAODC_23570 are separated by 319 nucleotides
MCAODC_23550: MCAODC_23550 - IS66 family transposase, at 1,436,020 to 1,436,877
_23550
MCAODC_23555: MCAODC_23555 - IS66-like element IS682 family transposase, at 1,436,881 to 1,438,494
_23555
MCAODC_23560: tnpB - IS66 family insertion sequence element accessory protein TnpB, at 1,438,525 to 1,438,875
tnpB
MCAODC_23565: MCAODC_23565 - putative transposase of insertion sequence IS682, at 1,438,872 to 1,439,297
_23565
MCAODC_23570: MCAODC_23570 - IS66 family transposase, at 1,439,617 to 1,440,102
_23570
Group
Condition
MCAODC
_23550
MCAODC
_23555
MCAODC
_23560
MCAODC
_23565
MCAODC
_23570
tnpB
phage
WM_EV240
-0.4
-0.1
-1.6
-0.3
-0.3
phage
Bas09
-0.1
+0.2
-0.5
-0.8
-0.0
no phage control
Control_ECRC101_WM
-0.1
-0.1
-0.3
-0.3
+0.0
phage
Bas14
-0.2
-0.0
+0.5
-0.9
-0.1
phage
WM_Bas41
+0.0
-0.4
+0.3
+0.0
-0.4
carbon source
Casamino-acids
+0.1
-0.4
-0.6
+0.2
+0.4
carbon source
D-Glucose
+0.3
-0.3
+0.3
-0.6
+0.2
phage
EV240
+0.2
+0.1
-0.7
+0.4
+0.1
no phage control
Control_ECRC101_WM
-0.0
-0.1
-0.1
+0.4
-0.0
phage
WM_TP9
+0.2
-0.2
+0.7
-0.6
+0.1
phage
Bas09
+0.0
+0.0
+0.8
-0.7
+0.2
phage
WM_RB68
-0.2
+0.2
+0.8
-0.6
+0.2
carbon source
Sodium-DL-Lactate
+0.1
-0.2
+0.3
+0.2
+0.1
phage
Bas14
-0.2
-0.2
+0.2
+0.3
+0.5
phage
EV240
+0.1
+0.3
+0.2
-0.1
-0.0
phage
WM_Bas09
+0.4
-0.4
+0.9
-0.1
-0.0
phage
WM_Bas09
+1.0
+0.2
-0.4
+0.2
-0.0
phage
TP9
+0.3
+0.3
+0.4
-0.0
+0.0
phage
WM_EV240
+0.8
+0.4
+0.1
+0.7
-0.9
carbon source
L-Arabinose
+0.0
-0.2
+1.0
+0.5
-0.2
carbon source
D-Glucose
+0.2
-0.1
+0.4
-0.1
+0.7
carbon source
Casamino-acids
+0.2
-0.2
+0.8
+0.2
+0.2
phage
WM_TP9
+0.6
-0.1
+0.5
+0.0
+0.1
carbon source
L-Arabinose
+0.2
-0.1
+0.6
+0.1
+0.3
phage
WM_Bas14
+0.0
-0.0
+0.3
+0.3
+0.6
carbon source
Sodium-DL-Lactate
-0.0
+0.1
+0.7
+0.7
-0.1
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