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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
MCAODC_23460 and iha are separated by 1451 nucleotides
iha and MCAODC_23470 are separated by 513 nucleotides
MCAODC_23470 and terE are separated by 422 nucleotides
terE and terD are separated by 68 nucleotides
MCAODC_23460: MCAODC_23460 - ShiA, at 1,418,347 to 1,418,565
_23460
MCAODC_23465: iha - bifunctional siderophore receptor/adhesin Iha, at 1,420,017 to 1,422,107
iha
MCAODC_23470: MCAODC_23470 - General stress protein 16U, at 1,422,621 to 1,423,007
_23470
MCAODC_23475: terE - Tellurium resistance protein TerE, at 1,423,430 to 1,424,005
terE
MCAODC_23480: terD - tellurium resistance membrane protein TerD, at 1,424,074 to 1,424,652
terD
Group
Condition
MCAODC
_23460
MCAODC
_23465
MCAODC
_23470
MCAODC
_23475
MCAODC
_23480
iha
terE
terD
phage
Bas09
+0.5
+0.0
+0.0
-0.1
-2.2
carbon source
Sodium-DL-Lactate
-0.1
-0.1
-0.3
-0.0
-1.0
carbon source
Casamino-acids
-0.6
+0.1
+0.9
-0.5
-1.1
phage
Bas09
+0.7
+0.1
-0.3
-0.7
-1.0
phage
WM_Bas14
+0.5
+0.1
-0.5
-0.3
-1.0
phage
WM_TP9
-1.3
-0.0
+0.1
+0.1
+0.2
phage
WM_EV240
-0.1
+0.2
+0.0
-0.2
-0.9
carbon source
Sodium-DL-Lactate
+0.4
-0.0
-0.1
-0.7
-0.2
no phage control
Control_ECRC101_WM
+0.6
+0.2
-0.5
+0.1
-0.9
phage
Bas14
-0.2
+0.2
-0.3
+0.0
-0.2
carbon source
D-Glucose
+0.7
-0.2
+0.0
-0.6
-0.3
carbon source
D-Glucose
+0.2
+0.1
+0.1
-0.3
-0.1
carbon source
L-Arabinose
-0.1
-0.0
-0.1
-0.3
+0.8
phage
WM_Bas09
+0.8
+0.2
+0.2
-0.1
-0.8
phage
WM_TP9
+0.0
+0.2
+0.4
+0.0
-0.3
carbon source
L-Arabinose
-0.5
+0.1
+0.3
+0.0
+0.5
phage
WM_RB68
+0.2
+0.2
+0.3
-0.1
-0.0
carbon source
Casamino-acids
+0.6
+0.1
+0.2
-0.3
+0.4
phage
WM_EV240
+1.1
+0.2
-0.2
+0.1
-0.1
phage
WM_Bas09
+0.9
+0.4
+0.4
-0.1
-0.3
phage
Bas14
+0.2
+0.1
+0.5
+0.4
+0.2
phage
WM_Bas41
+0.7
-0.0
+0.7
-0.2
+0.2
phage
EV240
-0.3
+0.2
+0.5
+0.2
+1.1
phage
TP9
+0.7
-0.0
+1.2
-0.3
-0.0
phage
EV240
-0.5
+0.1
+0.1
+1.1
+1.3
no phage control
Control_ECRC101_WM
+1.2
+0.1
+0.1
+0.3
+0.9
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