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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
MCAODC_23390 and MCAODC_23395 are separated by 52 nucleotides
MCAODC_23395 and MCAODC_23400 are separated by 95 nucleotides
MCAODC_23400 and MCAODC_23405 are separated by 88 nucleotides
MCAODC_23405 and MCAODC_23410 are separated by 457 nucleotides
MCAODC_23390: MCAODC_23390 - DUF4222 domain-containing protein, at 1,409,132 to 1,409,323
_23390
MCAODC_23395: MCAODC_23395 - Z1636-like protein, at 1,409,376 to 1,409,609
_23395
MCAODC_23400: MCAODC_23400 - DNA-binding protein, at 1,409,705 to 1,410,328
_23400
MCAODC_23405: MCAODC_23405 - hypothetical protein, at 1,410,417 to 1,410,926
_23405
MCAODC_23410: MCAODC_23410 - Membrane protein, at 1,411,384 to 1,411,842
_23410
Group
Condition
MCAODC
_23390
MCAODC
_23395
MCAODC
_23400
MCAODC
_23405
MCAODC
_23410
carbon source
L-Arabinose
-0.8
-1.7
+0.3
+0.2
+0.1
carbon source
D-Glucose
-0.2
-0.4
+0.0
+0.0
-1.1
phage
Bas09
-1.4
+0.5
-0.4
+0.1
-0.3
phage
EV240
-0.8
+0.3
-0.0
+0.2
-0.9
phage
Bas09
+0.1
+0.2
-0.8
-0.3
-0.5
carbon source
Casamino-acids
-0.9
-0.6
+0.1
-0.2
+0.5
phage
WM_TP9
-0.7
-0.1
+0.1
-0.1
-0.2
carbon source
D-Glucose
-0.9
-0.1
-0.5
+0.0
+0.5
no phage control
Control_ECRC101_WM
-0.4
-0.1
+0.3
+0.0
-0.7
carbon source
L-Arabinose
+0.7
-1.0
+0.2
-0.2
-0.5
phage
WM_Bas41
-0.2
-0.4
+0.2
+0.1
-0.4
carbon source
Casamino-acids
-0.5
-0.4
+0.0
+0.2
+0.0
phage
EV240
-0.6
-0.5
+0.5
+0.1
+0.2
phage
WM_Bas09
+0.1
+0.1
-0.0
+0.1
-0.4
carbon source
Sodium-DL-Lactate
-0.4
-0.4
+0.0
+0.1
+0.6
phage
WM_Bas09
-1.3
-0.2
+0.7
+0.2
+0.6
phage
WM_RB68
+0.6
-0.1
+0.1
-0.0
-0.3
phage
TP9
-0.5
+0.4
+0.7
+0.0
-0.3
phage
WM_TP9
-0.4
-0.2
+0.6
+0.0
+0.4
phage
WM_EV240
-0.1
+0.1
+0.3
+0.1
-0.0
phage
WM_Bas14
-0.3
+0.4
+0.2
+0.1
+0.1
carbon source
Sodium-DL-Lactate
+0.2
+0.3
-0.2
-0.3
+0.7
phage
WM_EV240
+1.0
-0.2
+0.1
+0.1
-0.5
no phage control
Control_ECRC101_WM
+0.2
+0.2
+0.6
+0.3
-0.4
phage
Bas14
-0.3
+0.6
+0.1
+0.2
+0.5
phage
Bas14
+0.6
+0.4
+0.3
-0.2
+0.7
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