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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
MCAODC_23295 and MCAODC_23300 overlap by 4 nucleotides
MCAODC_23300 and MCAODC_23305 overlap by 4 nucleotides
MCAODC_23305 and cah are separated by 110 nucleotides
cah and yeeP are separated by 371 nucleotides
MCAODC_23295: MCAODC_23295 - phospholipase, at 1,389,016 to 1,390,086
_23295
MCAODC_23300: MCAODC_23300 - chemotaxis protein, at 1,390,083 to 1,390,988
_23300
MCAODC_23305: MCAODC_23305 - dGTPase, at 1,390,985 to 1,393,369
_23305
MCAODC_23310: cah - calcium-binding autotransporter Cah, at 1,393,480 to 1,396,329
cah
MCAODC_23315: yeeP - 50S ribosome-binding GTPase, at 1,396,701 to 1,397,573
yeeP
Group
Condition
MCAODC
_23295
MCAODC
_23300
MCAODC
_23305
MCAODC
_23310
MCAODC
_23315
cah
yeeP
phage
EV240
N.D.
-2.0
-0.1
+0.1
-0.4
no phage control
Control_ECRC101_WM
N.D.
-0.3
-0.1
-0.1
-1.3
phage
WM_Bas09
N.D.
-2.4
+0.1
-0.0
+0.6
carbon source
Sodium-DL-Lactate
N.D.
-1.3
-0.1
-0.2
+0.0
carbon source
Casamino-acids
N.D.
-0.9
-0.0
-0.3
-0.1
no phage control
Control_ECRC101_WM
N.D.
-1.6
+0.4
-0.2
+0.1
phage
WM_TP9
N.D.
-1.3
+0.1
-0.0
+0.0
phage
WM_Bas41
N.D.
-0.8
+0.2
-0.1
-0.3
carbon source
L-Arabinose
N.D.
-0.5
-0.2
-0.1
-0.1
phage
EV240
N.D.
-0.3
+0.3
+0.0
-0.5
phage
WM_EV240
N.D.
-0.3
+0.3
+0.0
-0.5
phage
WM_Bas09
N.D.
-0.1
+0.0
-0.0
-0.4
phage
TP9
N.D.
-0.9
-0.0
+0.0
+0.5
phage
WM_Bas14
N.D.
+0.1
-0.0
-0.1
-0.3
phage
WM_EV240
N.D.
+0.1
-0.4
+0.1
-0.3
carbon source
D-Glucose
N.D.
+0.0
-0.0
-0.2
-0.1
phage
WM_RB68
N.D.
-0.5
+0.2
+0.2
+0.2
carbon source
L-Arabinose
N.D.
+0.2
+0.1
-0.5
+0.3
carbon source
Casamino-acids
N.D.
-0.5
-0.0
-0.1
+0.7
carbon source
D-Glucose
N.D.
+0.5
-0.2
+0.0
-0.1
phage
Bas09
N.D.
+0.7
+0.1
+0.0
-0.5
phage
Bas09
N.D.
+0.8
+0.1
+0.1
-0.4
carbon source
Sodium-DL-Lactate
N.D.
+0.4
+0.1
+0.0
+0.3
phage
Bas14
N.D.
+0.1
+0.3
+0.2
+0.2
phage
WM_TP9
N.D.
+0.9
+0.2
-0.2
+0.1
phage
Bas14
N.D.
+0.6
+0.1
+0.1
+0.1
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