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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
csgB and cgsD are separated by 753 nucleotides
cgsD and cgsE are separated by 4 nucleotides
cgsE and cgsF are separated by 24 nucleotides
cgsF and cgsG are separated by 26 nucleotides
MCAODC_23195: csgB - curlin minor subunit CsgB, at 1,376,934 to 1,377,389
csgB
MCAODC_23205: cgsD - transcriptional regulator CsgD, at 1,378,143 to 1,378,793
cgsD
MCAODC_23210: cgsE - curli production assembly/transport protein CsgE, at 1,378,798 to 1,379,187
cgsE
MCAODC_23215: cgsF - curli production assembly/transport protein CsgF, at 1,379,212 to 1,379,628
cgsF
MCAODC_23220: cgsG - curli production assembly/transport protein CsgG, at 1,379,655 to 1,380,488
cgsG
Group
Condition
MCAODC
_23195
MCAODC
_23205
MCAODC
_23210
MCAODC
_23215
MCAODC
_23220
csgB
cgsD
cgsE
cgsF
cgsG
phage
EV240
-0.3
-1.0
N.D.
-3.1
+0.5
phage
Bas09
+0.1
-1.1
N.D.
-2.4
-0.4
carbon source
L-Arabinose
-0.2
-1.1
N.D.
-0.3
+0.2
phage
TP9
+0.1
-0.3
N.D.
-1.0
+0.3
carbon source
Casamino-acids
+0.6
-1.4
N.D.
+0.0
-0.1
phage
WM_Bas09
+0.2
-0.6
N.D.
-0.2
-0.2
carbon source
Casamino-acids
+0.3
-1.0
N.D.
-0.2
+0.3
carbon source
D-Glucose
+0.4
-1.0
N.D.
+0.0
+0.2
carbon source
Sodium-DL-Lactate
+0.3
-0.3
N.D.
+0.0
-0.3
phage
WM_EV240
-0.2
-0.5
N.D.
+0.3
+0.0
phage
WM_TP9
-0.1
+0.2
N.D.
+0.0
-0.3
no phage control
Control_ECRC101_WM
+0.2
-0.2
N.D.
-0.3
+0.0
phage
WM_RB68
-0.0
+0.1
N.D.
-0.0
-0.3
no phage control
Control_ECRC101_WM
-0.2
-0.2
N.D.
-0.4
+0.6
carbon source
D-Glucose
+0.0
-0.3
N.D.
-0.1
+0.2
phage
WM_Bas41
+0.4
-0.9
N.D.
+0.2
+0.2
phage
WM_TP9
-0.0
-0.4
N.D.
+0.3
+0.1
phage
Bas09
+0.3
+0.4
N.D.
-0.4
-0.1
phage
WM_EV240
-0.1
-0.1
N.D.
+0.2
+0.2
carbon source
L-Arabinose
-0.1
+0.6
N.D.
-0.1
-0.0
phage
WM_Bas14
-0.1
+0.2
N.D.
+0.5
-0.0
phage
WM_Bas09
+0.3
+0.7
N.D.
-0.1
-0.0
carbon source
Sodium-DL-Lactate
-0.0
+0.4
N.D.
+0.4
+0.2
phage
EV240
-0.3
+0.4
N.D.
+0.8
+0.1
phage
Bas14
+0.4
+0.3
N.D.
+0.3
+0.5
phage
Bas14
+0.1
+0.3
N.D.
+0.9
+0.3
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