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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
thiK and lpoB overlap by 20 nucleotides
lpoB and MCAODC_22880 are separated by 13 nucleotides
MCAODC_22880 and hinT are separated by 2 nucleotides
hinT and fhuE are separated by 345 nucleotides
MCAODC_22870: thiK - thiamine kinase, at 1,317,288 to 1,318,112
thiK
MCAODC_22875: lpoB - penicillin-binding protein activator LpoB, at 1,318,093 to 1,318,734
lpoB
MCAODC_22880: MCAODC_22880 - DUF1425 domain-containing protein, at 1,318,748 to 1,319,125
_22880
MCAODC_22885: hinT - purine nucleoside phosphoramidase, at 1,319,128 to 1,319,487
hinT
MCAODC_22890: fhuE - ferric-rhodotorulic acid/ferric-coprogen receptor FhuE, at 1,319,833 to 1,322,022
fhuE
Group
Condition
MCAODC
_22870
MCAODC
_22875
MCAODC
_22880
MCAODC
_22885
MCAODC
_22890
thiK
lpoB
hinT
fhuE
phage
WM_EV240
-0.1
-0.8
-3.4
-3.4
+0.2
phage
Bas09
-0.0
-0.0
-0.2
-1.4
+0.1
phage
WM_Bas14
-0.1
+0.0
-0.8
-0.6
+0.1
phage
TP9
+0.8
+0.1
-1.0
-1.4
+0.2
phage
Bas14
+0.1
-0.1
+0.4
-1.5
-0.0
phage
EV240
+0.2
-0.7
-0.6
+0.1
-0.1
phage
Bas09
-0.1
-0.3
-1.4
+0.9
-0.1
carbon source
Casamino-acids
-0.2
-0.4
+0.3
-0.3
-0.1
phage
WM_EV240
+0.1
-0.8
-0.8
+1.1
+0.1
carbon source
Sodium-DL-Lactate
-0.1
+0.0
+0.1
-0.1
-0.1
phage
WM_RB68
+0.1
-0.2
-0.6
+0.7
-0.0
carbon source
L-Arabinose
-0.3
-0.8
+0.8
+0.3
+0.0
phage
Bas14
+0.7
-0.2
-1.1
+0.9
-0.1
phage
WM_Bas41
-0.0
-0.0
-1.0
+1.0
+0.1
phage
WM_Bas09
-0.2
-0.1
+0.3
+0.2
-0.1
carbon source
Sodium-DL-Lactate
-0.1
-0.2
+1.1
-0.6
+0.1
phage
WM_TP9
+0.1
-0.1
-0.2
+0.8
-0.1
carbon source
L-Arabinose
-0.2
-0.7
+0.1
+1.2
+0.1
phage
EV240
+0.4
-0.9
-0.4
+1.5
-0.0
no phage control
Control_ECRC101_WM
-0.3
+0.2
+0.6
+0.1
-0.0
carbon source
Casamino-acids
+0.2
-0.1
+0.1
+0.7
-0.0
phage
WM_TP9
+0.2
+0.0
+0.3
+0.4
+0.1
phage
WM_Bas09
+0.1
-0.1
+0.2
+1.2
+0.0
carbon source
D-Glucose
+0.3
+0.2
+0.5
+0.6
+0.1
no phage control
Control_ECRC101_WM
+0.2
+0.2
+0.2
+1.2
+0.2
carbon source
D-Glucose
-0.5
+0.2
+1.3
+1.3
+0.2
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