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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
potB and espK are separated by 363 nucleotides
espK and MCAODC_22475 are separated by 188 nucleotides
MCAODC_22475 and MCAODC_22480 are separated by 141 nucleotides
MCAODC_22480 and tnp-IS3 are separated by 10 nucleotides
MCAODC_22465: potB - spermidine/putrescine ABC transporter permease PotB, at 1,252,410 to 1,253,273
potB
MCAODC_22470: espK - type III secretion system effector EspK, at 1,253,637 to 1,254,998
espK
MCAODC_22475: MCAODC_22475 - hypothetical protein, at 1,255,187 to 1,255,420
_22475
MCAODC_22480: MCAODC_22480 - Mutator family transposase, at 1,255,562 to 1,255,861
_22480
MCAODC_22485: tnp-IS3 - IS3 family transposase, at 1,255,872 to 1,256,033
tnp-IS3
Group
Condition
MCAODC
_22465
MCAODC
_22470
MCAODC
_22475
MCAODC
_22480
MCAODC
_22485
potB
espK
tnp-IS3
phage
WM_EV240
-0.6
+0.0
-4.8
+0.6
N.D.
phage
WM_Bas09
+0.2
+0.2
-1.7
-0.4
N.D.
phage
Bas09
+0.3
-0.4
-0.3
-1.3
N.D.
phage
WM_TP9
+0.0
-0.3
-1.2
-0.1
N.D.
phage
WM_EV240
-0.4
-0.2
-1.2
+0.4
N.D.
phage
EV240
-0.4
+0.1
-0.9
+0.0
N.D.
carbon source
L-Arabinose
+0.1
+0.2
-0.9
-0.5
N.D.
carbon source
D-Glucose
-0.0
+0.0
-0.5
-0.4
N.D.
phage
WM_Bas09
-0.1
-0.7
+0.3
-0.2
N.D.
phage
EV240
-0.2
-0.2
+0.1
+0.1
N.D.
carbon source
Casamino-acids
+0.0
+0.3
-1.2
+0.6
N.D.
phage
WM_Bas41
-0.6
+0.0
+1.0
-0.6
N.D.
carbon source
D-Glucose
-0.4
+0.6
-0.0
-0.3
N.D.
no phage control
Control_ECRC101_WM
+0.4
-0.5
+0.3
-0.2
N.D.
phage
WM_TP9
-0.1
+0.0
+0.2
-0.1
N.D.
phage
Bas09
-0.2
-0.3
+0.6
-0.0
N.D.
phage
WM_Bas14
+0.3
+0.0
-0.1
+0.0
N.D.
carbon source
L-Arabinose
-0.2
+0.6
+0.3
-0.5
N.D.
carbon source
Sodium-DL-Lactate
-0.0
-0.0
-0.1
+0.4
N.D.
phage
Bas14
+0.0
-0.4
+0.8
+0.0
N.D.
carbon source
Sodium-DL-Lactate
+0.3
+0.5
-0.9
+0.7
N.D.
no phage control
Control_ECRC101_WM
+0.1
+0.3
+0.2
+0.0
N.D.
phage
Bas14
-0.2
-0.0
+1.0
+0.1
N.D.
phage
WM_RB68
+0.1
+0.1
+0.0
+0.8
N.D.
phage
TP9
+0.0
-0.4
+1.3
+0.3
N.D.
carbon source
Casamino-acids
+0.7
-0.2
-0.1
+1.5
N.D.
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