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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
potA and potB overlap by 17 nucleotides
potB and espK are separated by 363 nucleotides
espK and MCAODC_22475 are separated by 188 nucleotides
MCAODC_22475 and MCAODC_22480 are separated by 141 nucleotides
MCAODC_22460: potA - spermidine/putrescine ABC transporter ATP-binding protein PotA, at 1,251,290 to 1,252,426
potA
MCAODC_22465: potB - spermidine/putrescine ABC transporter permease PotB, at 1,252,410 to 1,253,273
potB
MCAODC_22470: espK - type III secretion system effector EspK, at 1,253,637 to 1,254,998
espK
MCAODC_22475: MCAODC_22475 - hypothetical protein, at 1,255,187 to 1,255,420
_22475
MCAODC_22480: MCAODC_22480 - Mutator family transposase, at 1,255,562 to 1,255,861
_22480
Group
Condition
MCAODC
_22460
MCAODC
_22465
MCAODC
_22470
MCAODC
_22475
MCAODC
_22480
potA
potB
espK
phage
WM_EV240
-0.0
-0.6
+0.0
-4.8
+0.6
phage
Bas09
-0.3
+0.3
-0.4
-0.3
-1.3
phage
WM_TP9
-0.3
+0.0
-0.3
-1.2
-0.1
phage
WM_EV240
-0.3
-0.4
-0.2
-1.2
+0.4
carbon source
D-Glucose
-0.8
-0.0
+0.0
-0.5
-0.4
phage
WM_Bas09
+0.3
+0.2
+0.2
-1.7
-0.4
phage
EV240
-0.2
-0.4
+0.1
-0.9
+0.0
carbon source
L-Arabinose
-0.0
+0.1
+0.2
-0.9
-0.5
phage
WM_Bas09
+0.1
-0.1
-0.7
+0.3
-0.2
carbon source
Casamino-acids
-0.3
+0.0
+0.3
-1.2
+0.6
phage
EV240
-0.3
-0.2
-0.2
+0.1
+0.1
phage
WM_Bas41
-0.2
-0.6
+0.0
+1.0
-0.6
carbon source
Sodium-DL-Lactate
-0.6
-0.0
-0.0
-0.1
+0.4
carbon source
D-Glucose
-0.1
-0.4
+0.6
-0.0
-0.3
phage
WM_TP9
-0.1
-0.1
+0.0
+0.2
-0.1
carbon source
L-Arabinose
-0.2
-0.2
+0.6
+0.3
-0.5
phage
Bas09
-0.0
-0.2
-0.3
+0.6
-0.0
no phage control
Control_ECRC101_WM
+0.1
+0.4
-0.5
+0.3
-0.2
phage
Bas14
-0.1
+0.0
-0.4
+0.8
+0.0
carbon source
Sodium-DL-Lactate
-0.2
+0.3
+0.5
-0.9
+0.7
phage
WM_Bas14
+0.3
+0.3
+0.0
-0.1
+0.0
no phage control
Control_ECRC101_WM
-0.0
+0.1
+0.3
+0.2
+0.0
phage
TP9
-0.3
+0.0
-0.4
+1.3
+0.3
phage
WM_RB68
-0.1
+0.1
+0.1
+0.0
+0.8
phage
Bas14
+0.1
-0.2
-0.0
+1.0
+0.1
carbon source
Casamino-acids
+0.1
+0.7
-0.2
-0.1
+1.5
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