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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
gpA1 and MCAODC_22160 overlap by 26 nucleotides
MCAODC_22160 and MCAODC_22165 are separated by 1211 nucleotides
MCAODC_22165 and MCAODC_22170 are separated by 185 nucleotides
MCAODC_22170 and MCAODC_22175 are separated by 7 nucleotides
MCAODC_22155: gpA1 - terminase, at 1,208,152 to 1,210,077
gpA1
MCAODC_22160: MCAODC_22160 - DNA-packaging protein, at 1,210,052 to 1,210,597
_22160
MCAODC_22165: MCAODC_22165 - DUF1398 domain-containing protein, at 1,211,809 to 1,212,219
_22165
MCAODC_22170: MCAODC_22170 - lysis protein, at 1,212,405 to 1,212,872
_22170
MCAODC_22175: MCAODC_22175 - hypothetical protein, at 1,212,880 to 1,213,026
_22175
Group
Condition
MCAODC
_22155
MCAODC
_22160
MCAODC
_22165
MCAODC
_22170
MCAODC
_22175
gpA1
phage
EV240
-0.4
-1.3
N.D.
N.D.
N.D.
carbon source
D-Glucose
-0.0
-1.5
N.D.
N.D.
N.D.
carbon source
L-Arabinose
+0.1
-0.9
N.D.
N.D.
N.D.
phage
Bas09
+0.5
-1.2
N.D.
N.D.
N.D.
no phage control
Control_ECRC101_WM
-0.7
+0.2
N.D.
N.D.
N.D.
no phage control
Control_ECRC101_WM
-0.9
+0.5
N.D.
N.D.
N.D.
carbon source
Sodium-DL-Lactate
+0.1
-0.5
N.D.
N.D.
N.D.
phage
TP9
+0.3
-0.6
N.D.
N.D.
N.D.
phage
Bas14
+0.3
-0.6
N.D.
N.D.
N.D.
phage
WM_Bas09
-0.6
+0.3
N.D.
N.D.
N.D.
phage
WM_EV240
-0.2
-0.1
N.D.
N.D.
N.D.
carbon source
Casamino-acids
-0.6
+0.4
N.D.
N.D.
N.D.
carbon source
L-Arabinose
+0.3
-0.5
N.D.
N.D.
N.D.
phage
WM_RB68
-0.0
-0.1
N.D.
N.D.
N.D.
phage
Bas14
+0.0
-0.1
N.D.
N.D.
N.D.
phage
WM_TP9
+0.2
-0.2
N.D.
N.D.
N.D.
phage
WM_TP9
-0.2
+0.2
N.D.
N.D.
N.D.
carbon source
D-Glucose
+0.2
-0.0
N.D.
N.D.
N.D.
phage
WM_Bas41
-0.4
+0.6
N.D.
N.D.
N.D.
phage
EV240
+0.5
-0.3
N.D.
N.D.
N.D.
phage
WM_Bas14
+0.3
-0.0
N.D.
N.D.
N.D.
carbon source
Casamino-acids
+0.2
+0.2
N.D.
N.D.
N.D.
phage
WM_Bas09
+0.2
+0.3
N.D.
N.D.
N.D.
carbon source
Sodium-DL-Lactate
+0.4
+0.5
N.D.
N.D.
N.D.
phage
WM_EV240
+0.5
+0.3
N.D.
N.D.
N.D.
phage
Bas09
+0.5
+0.4
N.D.
N.D.
N.D.
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