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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
sirB2 and prmC overlap by 4 nucleotides
prmC and prfA overlap by 1 nucleotides
prfA and hemA are separated by 41 nucleotides
hemA and lolB are separated by 213 nucleotides
MCAODC_21800: sirB2 - invasion regulator SirB2, at 1,142,656 to 1,143,048
sirB2
MCAODC_21805: prmC - peptide chain release factor N(5)-glutamine methyltransferase, at 1,143,045 to 1,143,878
prmC
MCAODC_21810: prfA - peptide chain release factor 1, at 1,143,878 to 1,144,960
prfA
MCAODC_21815: hemA - glutamyl-tRNA reductase, at 1,145,002 to 1,146,258
hemA
MCAODC_21820: lolB - lipoprotein insertase outer membrane protein LolB, at 1,146,472 to 1,147,095
lolB
Group
Condition
MCAODC
_21800
MCAODC
_21805
MCAODC
_21810
MCAODC
_21815
MCAODC
_21820
sirB2
prmC
prfA
hemA
lolB
phage
WM_TP9
-0.4
N.D.
N.D.
N.D.
N.D.
phage
TP9
-0.4
N.D.
N.D.
N.D.
N.D.
carbon source
L-Arabinose
-0.3
N.D.
N.D.
N.D.
N.D.
phage
WM_Bas09
-0.3
N.D.
N.D.
N.D.
N.D.
carbon source
D-Glucose
-0.3
N.D.
N.D.
N.D.
N.D.
carbon source
D-Glucose
-0.2
N.D.
N.D.
N.D.
N.D.
carbon source
Casamino-acids
-0.1
N.D.
N.D.
N.D.
N.D.
phage
EV240
-0.0
N.D.
N.D.
N.D.
N.D.
phage
WM_TP9
-0.0
N.D.
N.D.
N.D.
N.D.
phage
WM_EV240
+0.0
N.D.
N.D.
N.D.
N.D.
phage
WM_RB68
+0.0
N.D.
N.D.
N.D.
N.D.
phage
WM_Bas14
+0.1
N.D.
N.D.
N.D.
N.D.
phage
WM_EV240
+0.1
N.D.
N.D.
N.D.
N.D.
carbon source
Sodium-DL-Lactate
+0.1
N.D.
N.D.
N.D.
N.D.
carbon source
L-Arabinose
+0.1
N.D.
N.D.
N.D.
N.D.
carbon source
Casamino-acids
+0.1
N.D.
N.D.
N.D.
N.D.
phage
Bas09
+0.2
N.D.
N.D.
N.D.
N.D.
no phage control
Control_ECRC101_WM
+0.2
N.D.
N.D.
N.D.
N.D.
phage
WM_Bas41
+0.2
N.D.
N.D.
N.D.
N.D.
phage
WM_Bas09
+0.2
N.D.
N.D.
N.D.
N.D.
phage
Bas14
+0.2
N.D.
N.D.
N.D.
N.D.
no phage control
Control_ECRC101_WM
+0.3
N.D.
N.D.
N.D.
N.D.
phage
EV240
+0.4
N.D.
N.D.
N.D.
N.D.
phage
Bas14
+0.4
N.D.
N.D.
N.D.
N.D.
carbon source
Sodium-DL-Lactate
+0.5
N.D.
N.D.
N.D.
N.D.
phage
Bas09
+0.5
N.D.
N.D.
N.D.
N.D.
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