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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
oppA and MCAODC_21635 are separated by 373 nucleotides
MCAODC_21635 and MCAODC_21640 overlap by 25 nucleotides
MCAODC_21640 and ychE are separated by 26 nucleotides
ychE and ychT are separated by 30 nucleotides
MCAODC_21630: oppA - oligopeptide ABC transporter substrate-binding protein OppA, at 1,110,197 to 1,111,873
oppA
MCAODC_21635: MCAODC_21635 - hypothetical protein, at 1,112,247 to 1,112,408
_21635
MCAODC_21640: MCAODC_21640 - hypothetical protein, at 1,112,384 to 1,112,539
_21640
MCAODC_21645: ychE - NAAT family transporter YchE, at 1,112,566 to 1,113,213
ychE
MCAODC_21650: ychT - Protein YchT, at 1,113,244 to 1,113,297
ychT
Group
Condition
MCAODC
_21630
MCAODC
_21635
MCAODC
_21640
MCAODC
_21645
MCAODC
_21650
oppA
ychE
ychT
carbon source
Casamino-acids
+0.3
-4.2
N.D.
-0.4
+0.1
phage
WM_Bas41
-0.5
-3.4
N.D.
+0.0
-0.0
phage
EV240
-0.0
-0.2
N.D.
+0.0
-1.7
phage
WM_TP9
-0.6
+0.0
N.D.
-0.3
-0.3
carbon source
D-Glucose
-0.2
+0.1
N.D.
-0.0
-1.0
no phage control
Control_ECRC101_WM
-0.1
-2.0
N.D.
+0.1
+1.1
phage
WM_Bas09
-0.0
-0.9
N.D.
-0.3
+0.5
phage
Bas09
+0.1
-0.4
N.D.
-0.1
-0.3
carbon source
Sodium-DL-Lactate
-0.2
-0.3
N.D.
+0.1
-0.1
carbon source
L-Arabinose
-0.4
+0.5
N.D.
-0.1
-0.6
phage
Bas14
+0.2
-0.9
N.D.
+0.4
-0.1
phage
WM_Bas09
-0.2
+0.3
N.D.
+0.2
-0.5
no phage control
Control_ECRC101_WM
-0.0
-0.4
N.D.
-0.1
+0.6
carbon source
L-Arabinose
-0.3
+0.4
N.D.
-0.1
+0.2
phage
WM_EV240
-0.4
+0.5
N.D.
-0.0
+0.2
carbon source
D-Glucose
+0.2
+0.1
N.D.
+0.1
+0.0
phage
WM_TP9
+0.0
-0.1
N.D.
+0.2
+0.4
carbon source
Sodium-DL-Lactate
-0.0
+1.0
N.D.
+0.2
-0.4
phage
Bas09
-0.0
+1.4
N.D.
+0.0
-0.6
carbon source
Casamino-acids
+0.0
+0.1
N.D.
+0.5
+0.2
phage
WM_Bas14
+0.2
+0.6
N.D.
+0.1
-0.0
phage
WM_RB68
+0.0
+0.4
N.D.
+0.1
+0.5
phage
WM_EV240
+0.3
-0.8
N.D.
+0.1
+1.4
phage
TP9
+0.3
+1.3
N.D.
+0.1
-0.3
phage
EV240
+0.0
+1.4
N.D.
+0.5
+0.1
phage
Bas14
+0.3
+0.4
N.D.
-0.0
+1.4
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