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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
paa and MCAODC_21490 are separated by 698 nucleotides
MCAODC_21490 and MCAODC_21495 overlap by 4 nucleotides
MCAODC_21495 and MCAODC_21500 are separated by 186 nucleotides
MCAODC_21500 and eCs1768 are separated by 31 nucleotides
MCAODC_21485: paa - outer membrane adhesin Paa, at 1,086,792 to 1,087,550
paa
MCAODC_21490: MCAODC_21490 - hypothetical protein, at 1,088,249 to 1,088,413
_21490
MCAODC_21495: MCAODC_21495 - DNA-binding protein, at 1,088,410 to 1,088,991
_21495
MCAODC_21500: MCAODC_21500 - replication protein, at 1,089,178 to 1,089,600
_21500
MCAODC_21505: eCs1768 - DNA-binding protein, at 1,089,632 to 1,090,672
eCs1768
Group
Condition
MCAODC
_21485
MCAODC
_21490
MCAODC
_21495
MCAODC
_21500
MCAODC
_21505
paa
eCs1768
phage
WM_EV240
+0.1
-0.5
-2.5
+0.6
-0.4
phage
EV240
+0.3
-0.7
-2.5
+0.4
+0.1
phage
Bas14
+0.3
-1.2
-1.7
-0.1
+0.7
carbon source
L-Arabinose
+0.3
+0.4
-2.7
-0.1
+0.3
phage
Bas09
-0.5
+0.5
-1.8
+0.3
+0.2
phage
TP9
-0.1
-0.4
-0.9
+0.2
-0.1
phage
WM_EV240
-0.5
-0.0
+0.0
+0.0
-0.5
carbon source
Sodium-DL-Lactate
-0.4
-0.0
+0.2
-0.4
-0.1
phage
WM_RB68
-0.2
-0.3
+0.2
+0.0
-0.4
phage
WM_TP9
-0.3
+0.4
-1.0
+0.0
+0.4
phage
EV240
-0.0
+0.1
-0.3
-0.2
+0.1
phage
Bas09
+0.5
-0.4
+0.2
-0.1
-0.3
carbon source
Casamino-acids
-0.2
+0.4
+0.5
-0.3
-0.3
carbon source
D-Glucose
-0.3
+0.4
-0.2
-0.1
+0.3
carbon source
D-Glucose
+0.2
+0.5
-0.1
-0.1
-0.5
no phage control
Control_ECRC101_WM
-0.6
+0.1
+0.2
-0.0
+0.4
phage
WM_Bas41
-0.6
-0.1
+0.5
+0.1
+0.3
phage
WM_Bas09
-0.5
+0.0
+0.7
-0.4
+0.6
carbon source
L-Arabinose
+0.2
+0.0
+0.4
-0.4
+0.2
carbon source
Sodium-DL-Lactate
+0.2
+0.1
-0.0
+0.1
-0.1
phage
Bas14
-0.1
+0.4
-0.5
+0.6
+0.2
phage
WM_TP9
-0.0
+0.2
+0.5
+0.1
-0.1
carbon source
Casamino-acids
+0.1
+0.6
+0.3
+0.0
-0.3
no phage control
Control_ECRC101_WM
-0.3
-0.1
+0.4
+0.3
+0.4
phage
WM_Bas14
-0.1
+0.3
+0.9
-0.4
+0.1
phage
WM_Bas09
-0.0
-0.4
+0.3
+0.4
+0.7
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