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Protein
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Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
pphC and terY are separated by 77 nucleotides
terY and ibsA are separated by 220 nucleotides
ibsA and MCAODC_20725 are separated by 271 nucleotides
MCAODC_20725 and MCAODC_20735 are separated by 271 nucleotides
MCAODC_20700: pphC - Serine/threonine-protein phosphatase 3, at 954,706 to 955,386
pphC
MCAODC_20705: terY - Uncharacterized protein YegL, at 955,464 to 956,123
terY
MCAODC_20715: ibsA - Small toxic protein IbsA, at 956,344 to 956,403
ibsA
MCAODC_20725: MCAODC_20725 - Type I toxin-antitoxin system Ibs family toxin, at 956,675 to 956,731
_20725
MCAODC_20735: MCAODC_20735 - Type I toxin-antitoxin system Ibs family toxin, at 957,003 to 957,059
_20735
Group
Condition
MCAODC
_20700
MCAODC
_20705
MCAODC
_20715
MCAODC
_20725
MCAODC
_20735
pphC
terY
ibsA
phage
EV240
-0.3
-0.3
+0.1
-0.6
-1.0
carbon source
Sodium-DL-Lactate
-0.7
-0.3
-0.1
+0.3
-1.1
phage
Bas14
-0.4
-0.6
-0.4
-0.1
-0.3
phage
Bas09
-0.1
-0.4
-0.4
-0.2
-0.6
phage
EV240
-0.6
-0.5
-0.3
-0.3
+0.2
phage
TP9
-0.6
-0.6
-0.4
-0.1
+0.4
carbon source
D-Glucose
-0.2
-0.1
+0.0
+0.1
-0.8
phage
WM_Bas14
+0.0
+0.0
-0.2
-0.7
+0.1
no phage control
Control_ECRC101_WM
-0.9
+0.2
-0.3
-0.0
+0.3
phage
Bas09
-0.3
+0.0
-0.0
-0.9
+0.5
carbon source
Sodium-DL-Lactate
-1.2
+0.1
+0.5
+0.3
-0.3
carbon source
D-Glucose
-0.7
+0.3
-0.1
+0.7
-0.7
carbon source
Casamino-acids
-0.6
-0.0
+0.1
+0.0
+0.0
phage
WM_EV240
+0.2
-1.9
+0.2
-0.2
+1.0
carbon source
Casamino-acids
+0.3
+0.6
-0.1
-0.4
-0.4
carbon source
L-Arabinose
-0.2
-0.0
-0.1
+0.3
-0.2
phage
WM_TP9
+0.5
+0.5
-0.2
-0.2
-0.3
phage
WM_EV240
+0.4
+0.2
-0.2
+0.0
-0.2
phage
WM_Bas09
-0.0
-0.0
-0.2
+0.2
+0.3
phage
WM_Bas09
+0.3
+0.3
-0.2
-0.4
+0.2
phage
WM_Bas41
+0.3
-0.1
+0.1
+0.1
-0.2
phage
Bas14
-0.5
-0.4
-0.1
+0.6
+0.9
phage
WM_TP9
+0.5
-0.0
-0.1
+0.0
+0.3
carbon source
L-Arabinose
-0.0
+0.1
+0.8
-0.1
-0.1
phage
WM_RB68
+0.3
-0.1
+0.2
+0.2
+0.5
no phage control
Control_ECRC101_WM
+0.2
+0.5
+0.4
-0.2
+0.6
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