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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
alkA and yegD are separated by 181 nucleotides
yegD and yegI are separated by 12 nucleotides
yegI and pphC overlap by 4 nucleotides
pphC and terY are separated by 77 nucleotides
MCAODC_20685: alkA - DNA-3-methyladenine glycosylase 2, at 950,422 to 951,270
alkA
MCAODC_20690: yegD - molecular chaperone, at 951,452 to 952,756
yegD
MCAODC_20695: yegI - protein kinase YegI, at 952,769 to 954,709
yegI
MCAODC_20700: pphC - Serine/threonine-protein phosphatase 3, at 954,706 to 955,386
pphC
MCAODC_20705: terY - Uncharacterized protein YegL, at 955,464 to 956,123
terY
Group
Condition
MCAODC
_20685
MCAODC
_20690
MCAODC
_20695
MCAODC
_20700
MCAODC
_20705
alkA
yegD
yegI
pphC
terY
phage
WM_EV240
+0.3
-0.4
-0.6
+0.2
-1.9
phage
TP9
+0.1
-0.4
-0.0
-0.6
-0.6
phage
Bas14
+0.0
-0.2
+0.0
-0.4
-0.6
phage
EV240
+0.1
+0.2
-0.2
-0.6
-0.5
carbon source
Sodium-DL-Lactate
-0.2
-0.0
+0.2
-0.7
-0.3
phage
Bas14
+0.3
-0.4
-0.1
-0.5
-0.4
no phage control
Control_ECRC101_WM
+0.1
-0.3
-0.0
-0.9
+0.2
carbon source
Sodium-DL-Lactate
-0.1
+0.1
+0.2
-1.2
+0.1
carbon source
Casamino-acids
+0.1
-0.4
+0.1
-0.6
-0.0
phage
WM_Bas09
-0.0
-0.5
-0.2
-0.0
-0.0
phage
Bas09
+0.3
-0.1
-0.3
-0.1
-0.4
phage
WM_Bas14
-0.4
+0.1
-0.2
+0.0
+0.0
phage
EV240
+0.0
+0.2
+0.1
-0.3
-0.3
carbon source
D-Glucose
-0.2
+0.0
+0.3
-0.7
+0.3
carbon source
D-Glucose
+0.0
+0.3
-0.2
-0.2
-0.1
phage
WM_Bas41
+0.1
-0.3
-0.0
+0.3
-0.1
carbon source
L-Arabinose
-0.4
+0.2
+0.2
-0.0
+0.1
carbon source
L-Arabinose
-0.1
+0.3
+0.3
-0.2
-0.0
phage
WM_TP9
+0.1
-0.2
+0.0
+0.5
-0.0
no phage control
Control_ECRC101_WM
-0.1
-0.2
+0.0
+0.2
+0.5
phage
WM_RB68
-0.0
+0.2
-0.0
+0.3
-0.1
phage
Bas09
+0.4
+0.1
+0.1
-0.3
+0.0
carbon source
Casamino-acids
-0.3
-0.0
+0.0
+0.3
+0.6
phage
WM_TP9
-0.3
+0.0
+0.0
+0.5
+0.5
phage
WM_EV240
+0.2
+0.0
+0.1
+0.4
+0.2
phage
WM_Bas09
+0.2
+0.4
-0.1
+0.3
+0.3
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