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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
cpsG and manC are separated by 192 nucleotides
manC and wcaI are separated by 2 nucleotides
wcaI and gmm overlap by 4 nucleotides
gmm and fcl overlap by 1 nucleotides
MCAODC_20570: cpsG - colanic acid biosynthesis phosphomannomutase CpsG, at 924,783 to 926,153
cpsG
MCAODC_20575: manC - mannose-1-phosphate guanylyltransferase ManC, at 926,346 to 927,782
manC
MCAODC_20580: wcaI - colanic acid biosynthesis fucosyltransferase WcaI, at 927,785 to 929,008
wcaI
MCAODC_20585: gmm - GDP-mannose mannosyl hydrolase, at 929,005 to 929,487
gmm
MCAODC_20590: fcl - GDP-L-fucose synthase, at 929,487 to 930,452
fcl
Group
Condition
MCAODC
_20570
MCAODC
_20575
MCAODC
_20580
MCAODC
_20585
MCAODC
_20590
cpsG
manC
wcaI
gmm
fcl
carbon source
L-Arabinose
-1.0
-0.1
-0.3
-0.3
-0.2
phage
EV240
-1.2
+0.1
-0.5
-0.4
+0.4
phage
Bas14
-0.7
+0.1
-0.1
+0.1
-0.8
phage
Bas14
-0.4
-0.2
-0.0
-0.7
+0.2
phage
EV240
-0.9
-0.1
-0.5
+0.0
+0.5
carbon source
Casamino-acids
-0.7
-0.1
-0.3
+0.3
+0.1
phage
WM_EV240
+0.3
+0.2
-0.5
+0.2
-0.6
phage
Bas09
-0.2
+0.0
-0.3
-0.4
+0.5
carbon source
D-Glucose
+0.0
-0.3
+0.2
+0.1
-0.3
carbon source
Sodium-DL-Lactate
-0.1
-0.1
+0.2
-0.1
-0.0
phage
WM_Bas09
-0.3
+0.1
-0.2
+0.0
+0.3
phage
WM_TP9
-0.3
+0.0
+0.0
-0.2
+0.4
phage
Bas09
-0.2
+0.1
-0.3
+0.3
-0.0
phage
WM_Bas14
+0.4
+0.1
-0.2
+0.1
-0.4
carbon source
L-Arabinose
+0.1
+0.1
-0.1
+0.2
-0.3
phage
WM_TP9
+0.1
+0.2
-0.1
-0.1
-0.0
carbon source
Sodium-DL-Lactate
+0.3
-0.2
+0.2
+0.1
-0.2
no phage control
Control_ECRC101_WM
+0.4
+0.1
-0.3
-0.2
+0.2
phage
WM_EV240
-0.3
-0.2
-0.2
+0.5
+0.3
no phage control
Control_ECRC101_WM
+0.1
-0.1
-0.1
+0.0
+0.3
phage
WM_RB68
-0.1
+0.0
+0.1
+0.3
+0.2
carbon source
Casamino-acids
+0.4
-0.1
-0.1
+0.2
+0.2
phage
WM_Bas09
-0.1
-0.2
+0.2
+0.4
+0.4
carbon source
D-Glucose
+0.9
+0.2
-0.0
-0.3
-0.1
phage
WM_Bas41
+0.4
+0.1
+0.2
+0.5
-0.1
phage
TP9
+0.9
+0.3
-0.1
-0.1
+0.5
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