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Protein
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Fitness for 5 genes in
Escherichia coli ECRC101
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500 nt
MCAODC_20540 and wcaM are separated by 157 nucleotides
wcaM and wcaL are separated by 10 nucleotides
wcaL and wcaK overlap by 4 nucleotides
wcaK and wzxC are separated by 179 nucleotides
MCAODC_20540: MCAODC_20540 - N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,o ctacis-undecaprenol 4-epimerase, at 916,619 to 917,614
_20540
MCAODC_20545: wcaM - colanic acid biosynthesis protein WcaM, at 917,772 to 919,166
wcaM
MCAODC_20550: wcaL - colanic acid biosynthesis glycosyltransferase WcaL, at 919,177 to 920,397
wcaL
MCAODC_20555: wcaK - colanic acid biosynthesis pyruvyl transferase WcaK, at 920,394 to 921,674
wcaK
MCAODC_20560: wzxC - colanic acid undecaprenyl disphosphate flippase WzxC, at 921,854 to 923,332
wzxC
Group
Condition
MCAODC
_20540
MCAODC
_20545
MCAODC
_20550
MCAODC
_20555
MCAODC
_20560
wcaM
wcaL
wcaK
wzxC
phage
WM_Bas41
-6.5
+0.0
-0.1
+0.0
-0.5
phage
WM_Bas09
-6.9
+0.2
-0.3
-0.1
+0.2
no phage control
Control_ECRC101_WM
-5.4
-0.1
-0.1
+0.1
-0.1
phage
WM_EV240
-5.4
+0.1
-0.3
+0.3
-0.4
phage
WM_Bas09
-5.7
+0.1
+0.1
+0.2
-0.1
phage
WM_EV240
-6.0
+0.4
-0.2
+0.2
+0.3
phage
EV240
-4.9
+0.6
+0.3
+0.2
-0.7
phage
WM_Bas14
-4.1
-0.1
+0.2
+0.1
-0.0
phage
EV240
-4.9
+0.8
-0.1
+0.1
-0.0
no phage control
Control_ECRC101_WM
-3.2
-0.1
+0.0
-0.3
+0.1
phage
WM_RB68
-3.0
+0.1
+0.2
-0.1
+0.0
phage
Bas14
-0.2
+0.0
-0.4
+0.1
-0.3
phage
WM_TP9
-1.2
+0.2
-0.0
-0.1
+0.6
carbon source
Sodium-DL-Lactate
+0.3
-0.0
-0.2
-0.3
-0.3
carbon source
L-Arabinose
+0.1
-0.1
-0.3
-0.1
-0.0
carbon source
Sodium-DL-Lactate
+0.4
-0.1
+0.0
-0.4
-0.1
carbon source
Casamino-acids
+0.7
+0.1
-0.1
-0.5
-0.3
carbon source
D-Glucose
+0.0
-0.0
+0.0
-0.1
+0.0
carbon source
D-Glucose
+0.0
-0.2
+0.0
-0.1
+0.3
carbon source
Casamino-acids
+0.5
+0.1
-0.0
-0.4
-0.0
phage
Bas14
-0.3
+0.2
+0.1
-0.2
+0.5
carbon source
L-Arabinose
+0.2
-0.1
-0.0
+0.1
+0.4
phage
Bas09
+0.7
+0.2
+0.4
-0.1
-0.0
phage
Bas09
+1.4
+0.0
-0.2
-0.0
+0.0
phage
WM_TP9
+0.8
+0.1
+0.0
-0.0
+0.3
phage
TP9
+2.2
+0.1
-0.1
+0.0
+0.1
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