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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
yedJ and MCAODC_19810 are separated by 970 nucleotides
MCAODC_19810 and MCAODC_19815 overlap by 34 nucleotides
MCAODC_19815 and hchA are separated by 591 nucleotides
hchA and hprS are separated by 107 nucleotides
MCAODC_19800: yedJ - phosphohydrolase, at 786,139 to 786,834
yedJ
MCAODC_19810: MCAODC_19810 - Putative outer membrane protein, at 787,805 to 788,449
_19810
MCAODC_19815: MCAODC_19815 - Outer membrane protein, at 788,416 to 788,991
_19815
MCAODC_19820: hchA - protein deglycase HchA, at 789,583 to 790,434
hchA
MCAODC_19825: hprS - two-component system sensor histidine kinase HprS, at 790,542 to 791,900
hprS
Group
Condition
MCAODC
_19800
MCAODC
_19810
MCAODC
_19815
MCAODC
_19820
MCAODC
_19825
yedJ
hchA
hprS
carbon source
Sodium-DL-Lactate
-1.4
+0.0
-0.3
+0.2
+0.1
phage
EV240
-1.5
+0.2
+0.0
-0.1
+0.4
phage
TP9
-1.1
+0.3
-0.2
+0.1
+0.2
carbon source
L-Arabinose
-0.9
+0.2
+0.2
+0.1
+0.0
phage
Bas14
-0.4
+0.2
-0.0
+0.1
-0.1
carbon source
D-Glucose
+0.7
+0.1
+0.1
-0.2
-1.0
phage
WM_RB68
-0.5
+0.3
+0.1
+0.2
-0.1
phage
WM_Bas41
-0.4
-0.0
-0.1
-0.2
+0.9
phage
WM_EV240
-0.4
+0.1
+0.5
+0.1
-0.2
carbon source
Sodium-DL-Lactate
+0.5
+0.1
+0.0
-0.1
-0.3
carbon source
L-Arabinose
+0.2
+0.2
+0.4
-0.1
-0.2
phage
Bas09
-0.3
+0.1
-0.0
+0.4
+0.3
carbon source
D-Glucose
-0.2
+0.2
+0.4
+0.0
+0.0
carbon source
Casamino-acids
+0.1
+0.1
+0.3
+0.0
+0.0
phage
Bas09
-0.1
+0.1
+0.1
+0.1
+0.2
no phage control
Control_ECRC101_WM
+0.7
+0.0
-0.1
-0.0
-0.0
phage
EV240
-0.1
+0.1
+0.0
+0.2
+0.5
phage
WM_Bas14
+0.5
+0.1
-0.1
+0.1
+0.2
phage
WM_TP9
+0.7
-0.0
+0.2
-0.1
+0.2
phage
WM_Bas09
+0.6
+0.1
+0.4
-0.0
-0.1
phage
WM_Bas09
+0.7
-0.1
+0.3
-0.1
+0.3
phage
WM_TP9
+0.6
+0.4
+0.0
-0.1
+0.2
phage
WM_EV240
+0.3
-0.0
+0.2
+0.3
+0.4
phage
Bas14
+0.6
+0.1
+0.0
+0.4
+0.4
no phage control
Control_ECRC101_WM
+0.6
+0.6
+0.1
+0.1
+0.4
carbon source
Casamino-acids
+1.1
+0.2
-0.2
+0.3
+0.7
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