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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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500 nt
yedP and yedQ overlap by 4 nucleotides
yedQ and yodC are separated by 170 nucleotides
yodC and yedI are separated by 78 nucleotides
yedI and yedA are separated by 172 nucleotides
MCAODC_19765: yedP - mannosyl-3-phosphoglycerate phosphatase-related protein, at 779,266 to 780,081
yedP
MCAODC_19770: yedQ - cellulose biosynthesis regulator YedQ, at 780,078 to 781,772
yedQ
MCAODC_19775: yodC - Uncharacterized protein YodC, at 781,943 to 782,125
yodC
MCAODC_19780: yedI - Inner membrane protein YedI, at 782,204 to 783,121
yedI
MCAODC_19785: yedA - drug/metabolite exporter YedA, at 783,294 to 784,214
yedA
Group
Condition
MCAODC
_19765
MCAODC
_19770
MCAODC
_19775
MCAODC
_19780
MCAODC
_19785
yedP
yedQ
yodC
yedI
yedA
phage
TP9
+0.2
-0.3
-3.1
+0.1
+0.2
carbon source
D-Glucose
+0.2
-0.2
-0.9
+0.2
-0.0
phage
EV240
+0.4
+0.1
-1.1
-0.5
+0.4
carbon source
D-Glucose
-0.4
+0.1
-0.3
-0.1
+0.0
carbon source
L-Arabinose
+0.2
+0.1
-0.6
+0.1
-0.3
phage
Bas14
+0.5
+1.7
-1.7
-0.7
-0.0
carbon source
Casamino-acids
-0.2
+0.3
-0.4
-0.1
+0.2
carbon source
Casamino-acids
+0.5
-0.0
-0.3
-0.2
-0.1
carbon source
Sodium-DL-Lactate
-0.3
+0.1
+0.2
-0.2
+0.3
phage
Bas09
+0.0
-0.2
+0.6
-0.2
-0.1
carbon source
Sodium-DL-Lactate
+0.3
+0.3
-0.5
+0.1
+0.0
no phage control
Control_ECRC101_WM
+0.0
+0.1
-0.3
+0.1
+0.2
phage
WM_Bas09
+0.3
+0.0
+0.2
-0.1
-0.2
phage
WM_RB68
+0.3
-0.0
-0.3
+0.1
+0.2
carbon source
L-Arabinose
+0.4
-0.1
+0.1
+0.0
+0.0
phage
WM_TP9
+0.3
+0.1
+0.3
-0.2
+0.1
phage
Bas09
+0.6
-0.3
+0.5
-0.2
+0.0
phage
WM_Bas14
+0.2
-0.0
+0.5
+0.3
-0.3
phage
WM_Bas41
+0.1
+0.2
+0.4
-0.0
+0.2
phage
WM_TP9
+0.5
+0.4
-0.3
+0.1
+0.2
phage
EV240
+0.7
+0.2
+0.5
-0.5
+0.1
no phage control
Control_ECRC101_WM
+0.4
+0.1
+0.4
-0.1
+0.1
phage
WM_Bas09
+0.0
-0.2
+0.8
+0.0
+0.4
phage
WM_EV240
+0.4
+0.2
+0.1
+0.2
+0.3
phage
Bas14
+0.7
+1.9
-0.3
-0.9
+0.2
phage
WM_EV240
+1.0
-0.1
+0.4
+0.2
+0.5
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