Fitness for 5 genes in Escherichia coli ECRC101

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500 ntrcsA and dsrB are separated by 43 nucleotidesdsrB and yodD are separated by 162 nucleotidesyodD and yedP are separated by 297 nucleotidesyedP and yedQ overlap by 4 nucleotides MCAODC_19745: rcsA - transcriptional regulator RcsA, at 777,723 to 778,346 rcsA MCAODC_19750: dsrB - protein DsrB, at 778,390 to 778,578 dsrB MCAODC_19755: yodD - YodD family peroxide/acid resistance protein, at 778,741 to 778,968 yodD MCAODC_19765: yedP - mannosyl-3-phosphoglycerate phosphatase-related protein, at 779,266 to 780,081 yedP MCAODC_19770: yedQ - cellulose biosynthesis regulator YedQ, at 780,078 to 781,772 yedQ
Group Condition MCAODC_19745 MCAODC_19750 MCAODC_19755 MCAODC_19765 MCAODC_19770
rcsA dsrB yodD yedP yedQ
phage WM_Bas41 +0.3 -2.2 -0.2 +0.1 +0.2
phage WM_Bas09 +0.3 -1.2 -0.3 +0.0 -0.2
phage WM_Bas09 -0.5 -0.7 -0.3 +0.3 +0.0
phage WM_EV240 +0.0 -1.2 -0.1 +0.4 +0.2
phage Bas09 -0.2 -0.2 -0.5 +0.6 -0.3
phage EV240 +0.4 -1.6 -0.0 +0.7 +0.2
phage TP9 +0.6 +0.1 -0.9 +0.2 -0.3
phage Bas09 -0.2 +0.3 +0.1 +0.0 -0.2
no phage control Control_ECRC101_WM -0.1 -0.0 -0.3 +0.4 +0.1
phage WM_TP9 +0.3 -0.4 -0.2 +0.3 +0.1
carbon source Casamino-acids +0.2 -0.1 +0.0 -0.2 +0.3
phage WM_RB68 +0.6 -0.7 +0.1 +0.3 -0.0
carbon source D-Glucose -0.5 +0.5 +0.4 +0.2 -0.2
carbon source L-Arabinose -0.4 -0.2 +0.9 +0.2 +0.1
phage WM_Bas14 +0.3 +0.2 -0.1 +0.2 -0.0
carbon source Sodium-DL-Lactate +1.1 -0.6 +0.4 -0.3 +0.1
carbon source L-Arabinose -0.5 +0.5 +0.4 +0.4 -0.1
carbon source D-Glucose -0.2 +0.3 +0.9 -0.4 +0.1
no phage control Control_ECRC101_WM +0.6 +0.4 -0.0 +0.0 +0.1
phage WM_TP9 -0.0 +0.6 -0.3 +0.5 +0.4
carbon source Sodium-DL-Lactate +0.5 -0.0 +0.2 +0.3 +0.3
phage EV240 +0.5 +0.2 +0.1 +0.4 +0.1
phage WM_EV240 +1.4 -0.1 -0.7 +1.0 -0.1
phage Bas14 +0.7 -1.6 +0.3 +0.7 +1.9
carbon source Casamino-acids +0.4 +0.8 +0.7 +0.5 -0.0
phage Bas14 +0.9 +0.8 +0.8 +0.5 +1.7
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