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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
rcsA and dsrB are separated by 43 nucleotides
dsrB and yodD are separated by 162 nucleotides
yodD and yedP are separated by 297 nucleotides
yedP and yedQ overlap by 4 nucleotides
MCAODC_19745: rcsA - transcriptional regulator RcsA, at 777,723 to 778,346
rcsA
MCAODC_19750: dsrB - protein DsrB, at 778,390 to 778,578
dsrB
MCAODC_19755: yodD - YodD family peroxide/acid resistance protein, at 778,741 to 778,968
yodD
MCAODC_19765: yedP - mannosyl-3-phosphoglycerate phosphatase-related protein, at 779,266 to 780,081
yedP
MCAODC_19770: yedQ - cellulose biosynthesis regulator YedQ, at 780,078 to 781,772
yedQ
Group
Condition
MCAODC
_19745
MCAODC
_19750
MCAODC
_19755
MCAODC
_19765
MCAODC
_19770
rcsA
dsrB
yodD
yedP
yedQ
phage
WM_Bas41
+0.3
-2.2
-0.2
+0.1
+0.2
phage
WM_Bas09
+0.3
-1.2
-0.3
+0.0
-0.2
phage
WM_Bas09
-0.5
-0.7
-0.3
+0.3
+0.0
phage
WM_EV240
+0.0
-1.2
-0.1
+0.4
+0.2
phage
Bas09
-0.2
-0.2
-0.5
+0.6
-0.3
phage
EV240
+0.4
-1.6
-0.0
+0.7
+0.2
phage
TP9
+0.6
+0.1
-0.9
+0.2
-0.3
phage
Bas09
-0.2
+0.3
+0.1
+0.0
-0.2
no phage control
Control_ECRC101_WM
-0.1
-0.0
-0.3
+0.4
+0.1
phage
WM_TP9
+0.3
-0.4
-0.2
+0.3
+0.1
carbon source
Casamino-acids
+0.2
-0.1
+0.0
-0.2
+0.3
phage
WM_RB68
+0.6
-0.7
+0.1
+0.3
-0.0
carbon source
D-Glucose
-0.5
+0.5
+0.4
+0.2
-0.2
carbon source
L-Arabinose
-0.4
-0.2
+0.9
+0.2
+0.1
phage
WM_Bas14
+0.3
+0.2
-0.1
+0.2
-0.0
carbon source
Sodium-DL-Lactate
+1.1
-0.6
+0.4
-0.3
+0.1
carbon source
L-Arabinose
-0.5
+0.5
+0.4
+0.4
-0.1
carbon source
D-Glucose
-0.2
+0.3
+0.9
-0.4
+0.1
no phage control
Control_ECRC101_WM
+0.6
+0.4
-0.0
+0.0
+0.1
phage
WM_TP9
-0.0
+0.6
-0.3
+0.5
+0.4
carbon source
Sodium-DL-Lactate
+0.5
-0.0
+0.2
+0.3
+0.3
phage
EV240
+0.5
+0.2
+0.1
+0.4
+0.1
phage
WM_EV240
+1.4
-0.1
-0.7
+1.0
-0.1
phage
Bas14
+0.7
-1.6
+0.3
+0.7
+1.9
carbon source
Casamino-acids
+0.4
+0.8
+0.7
+0.5
-0.0
phage
Bas14
+0.9
+0.8
+0.8
+0.5
+1.7
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