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Protein
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Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
fliQ and fliR are separated by 7 nucleotides
fliR and rcsA are separated by 289 nucleotides
rcsA and dsrB are separated by 43 nucleotides
dsrB and yodD are separated by 162 nucleotides
MCAODC_19735: fliQ - flagellar biosynthesis protein FliQ, at 776,371 to 776,640
fliQ
MCAODC_19740: fliR - flagellar type III secretion system protein FliR, at 776,648 to 777,433
fliR
MCAODC_19745: rcsA - transcriptional regulator RcsA, at 777,723 to 778,346
rcsA
MCAODC_19750: dsrB - protein DsrB, at 778,390 to 778,578
dsrB
MCAODC_19755: yodD - YodD family peroxide/acid resistance protein, at 778,741 to 778,968
yodD
Group
Condition
MCAODC
_19735
MCAODC
_19740
MCAODC
_19745
MCAODC
_19750
MCAODC
_19755
fliQ
fliR
rcsA
dsrB
yodD
phage
Bas14
N.D.
-1.8
+0.7
-1.6
+0.3
phage
WM_Bas41
N.D.
+0.4
+0.3
-2.2
-0.2
phage
WM_Bas09
N.D.
+0.0
-0.5
-0.7
-0.3
phage
WM_EV240
N.D.
+0.1
+0.0
-1.2
-0.1
phage
Bas09
N.D.
+0.0
-0.2
-0.2
-0.5
phage
WM_Bas09
N.D.
+0.5
+0.3
-1.2
-0.3
phage
TP9
N.D.
-0.4
+0.6
+0.1
-0.9
phage
EV240
N.D.
+0.8
+0.4
-1.6
-0.0
no phage control
Control_ECRC101_WM
N.D.
+0.2
-0.1
-0.0
-0.3
phage
WM_TP9
N.D.
+0.1
+0.3
-0.4
-0.2
carbon source
Casamino-acids
N.D.
-0.0
+0.2
-0.1
+0.0
phage
Bas09
N.D.
+0.0
-0.2
+0.3
+0.1
carbon source
D-Glucose
N.D.
-0.1
-0.5
+0.5
+0.4
phage
WM_RB68
N.D.
+0.4
+0.6
-0.7
+0.1
phage
WM_Bas14
N.D.
+0.0
+0.3
+0.2
-0.1
phage
WM_TP9
N.D.
+0.2
-0.0
+0.6
-0.3
no phage control
Control_ECRC101_WM
N.D.
-0.3
+0.6
+0.4
-0.0
carbon source
L-Arabinose
N.D.
+0.3
-0.5
+0.5
+0.4
carbon source
L-Arabinose
N.D.
+0.5
-0.4
-0.2
+0.9
carbon source
Sodium-DL-Lactate
N.D.
+0.3
+0.5
-0.0
+0.2
carbon source
Sodium-DL-Lactate
N.D.
+0.2
+1.1
-0.6
+0.4
phage
WM_EV240
N.D.
+0.6
+1.4
-0.1
-0.7
phage
EV240
N.D.
+0.4
+0.5
+0.2
+0.1
carbon source
D-Glucose
N.D.
+0.4
-0.2
+0.3
+0.9
phage
Bas14
N.D.
-0.8
+0.9
+0.8
+0.8
carbon source
Casamino-acids
N.D.
+0.4
+0.4
+0.8
+0.7
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