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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
kdgA and edd are separated by 36 nucleotides
edd and zwf are separated by 234 nucleotides
zwf and MCAODC_19075 are separated by 165 nucleotides
MCAODC_19075 and hexR are separated by 22 nucleotides
MCAODC_19060: kdgA - bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase, at 663,213 to 663,854
kdgA
MCAODC_19065: edd - phosphogluconate dehydratase, at 663,891 to 665,702
edd
MCAODC_19070: zwf - glucose-6-phosphate dehydrogenase, at 665,937 to 667,412
zwf
MCAODC_19075: MCAODC_19075 - hypothetical protein, at 667,578 to 667,727
_19075
MCAODC_19080: hexR - DNA-binding transcriptional regulator HexR, at 667,750 to 668,619
hexR
Group
Condition
MCAODC
_19060
MCAODC
_19065
MCAODC
_19070
MCAODC
_19075
MCAODC
_19080
kdgA
edd
zwf
hexR
phage
Bas09
-2.4
-0.1
-1.0
-0.6
-0.4
phage
WM_Bas41
-3.3
+0.1
-0.9
+0.2
+0.1
phage
Bas14
-2.4
+0.1
-1.1
+0.1
-0.4
carbon source
Casamino-acids
-4.1
+0.4
+1.2
-0.3
-0.1
phage
WM_TP9
-0.8
-0.4
-1.6
-0.2
+0.3
phage
TP9
-2.1
+0.0
-0.2
-0.2
-0.1
phage
Bas09
-2.2
-0.8
+0.3
+0.6
-0.3
carbon source
L-Arabinose
-4.1
-0.1
+1.0
+0.7
-0.0
phage
Bas14
-0.1
+0.1
-1.9
-0.1
-0.4
phage
WM_EV240
-2.8
+0.3
+0.9
-0.3
-0.1
phage
WM_EV240
-2.1
-0.1
-0.4
+0.2
+0.5
no phage control
Control_ECRC101_WM
-1.4
-0.5
-0.7
+0.4
+0.2
phage
WM_TP9
-1.2
-0.1
-0.8
+0.3
+0.1
carbon source
L-Arabinose
-1.7
-0.0
+0.2
+0.1
-0.2
carbon source
Sodium-DL-Lactate
-0.7
+0.2
-0.1
+0.3
-1.0
no phage control
Control_ECRC101_WM
-0.9
-0.4
-0.3
+0.3
+0.1
phage
WM_Bas09
-1.3
-0.1
-0.1
+0.4
+0.1
carbon source
D-Glucose
-0.3
-0.4
-0.6
+0.7
-0.4
carbon source
Sodium-DL-Lactate
-0.1
+0.1
+0.1
+0.0
-1.1
carbon source
D-Glucose
-0.3
-0.6
+0.1
+0.0
-0.0
phage
EV240
-2.3
-0.5
+2.3
+0.3
-0.3
phage
WM_Bas14
+0.2
-0.1
-0.8
+0.3
+0.1
phage
WM_RB68
+0.6
-0.2
-1.4
+0.6
+0.2
phage
EV240
-0.5
-0.5
+2.7
-0.5
-1.2
carbon source
Casamino-acids
+0.5
-0.3
-0.5
+0.4
+0.1
phage
WM_Bas09
+0.1
+0.0
+0.4
-0.2
+0.3
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