Fitness for 5 genes in Escherichia coli ECRC101

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500 ntdgcJ and yeaK are separated by 42 nucleotidesyeaK and yeaL are separated by 274 nucleotidesyeaL and nimR overlap by 44 nucleotidesnimR and nimT are separated by 99 nucleotides MCAODC_18715: dgcJ - diguanylate cyclase DgcJ, at 602,914 to 604,404 dgcJ MCAODC_18720: yeaK - mischarged aminoacyl-tRNA deacylase, at 604,447 to 604,950 yeaK MCAODC_18725: yeaL - UPF0756 membrane protein CKO_01811, at 605,225 to 605,671 yeaL MCAODC_18730: nimR - DNA-binding transcriptional regulator NimR, at 605,628 to 606,446 nimR MCAODC_18735: nimT - 2-nitroimidazole transporter, at 606,546 to 607,727 nimT
Group Condition MCAODC_18715 MCAODC_18720 MCAODC_18725 MCAODC_18730 MCAODC_18735
dgcJ yeaK yeaL nimR nimT
phage Bas09 +0.1 -0.9 N.D. -1.5 +0.0
phage WM_Bas41 +0.2 -0.4 N.D. -0.9 -0.4
phage WM_Bas09 -0.1 -0.3 N.D. -0.2 -0.4
phage WM_EV240 +0.1 -0.5 N.D. -0.4 +0.1
phage TP9 -0.0 -0.0 N.D. -0.5 -0.2
phage WM_TP9 +0.0 -0.3 N.D. -0.2 -0.0
carbon source Casamino-acids +0.5 -0.6 N.D. -0.6 +0.3
no phage control Control_ECRC101_WM +0.0 -0.8 N.D. +0.2 +0.2
phage WM_TP9 +0.3 -0.3 N.D. -0.6 +0.2
phage WM_RB68 -0.1 -0.1 N.D. -0.2 -0.0
phage WM_Bas14 -0.1 -0.2 N.D. -0.2 +0.2
phage WM_EV240 -0.0 +0.4 N.D. -0.7 -0.0
phage Bas09 +0.0 +0.8 N.D. -0.8 -0.2
phage EV240 -0.2 +0.0 N.D. +0.3 -0.4
carbon source Casamino-acids +0.1 -0.4 N.D. -0.1 +0.2
phage EV240 -0.3 +0.7 N.D. -0.4 +0.1
carbon source Sodium-DL-Lactate +0.3 +0.2 N.D. -0.3 -0.0
carbon source L-Arabinose +0.2 -0.1 N.D. +0.0 +0.3
phage WM_Bas09 +0.1 -0.1 N.D. +0.2 +0.3
phage Bas14 +1.0 -0.8 N.D. -0.1 +0.3
no phage control Control_ECRC101_WM +0.2 +0.8 N.D. -0.5 -0.0
carbon source L-Arabinose +0.1 -0.2 N.D. -0.1 +0.7
carbon source D-Glucose +0.3 -0.2 N.D. +0.1 +0.3
carbon source Sodium-DL-Lactate +0.1 +0.1 N.D. -0.3 +0.6
carbon source D-Glucose +0.6 +0.1 N.D. -0.3 +0.2
phage Bas14 +1.4 -0.2 N.D. -0.3 +0.3
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