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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
MCAODC_18625 and MCAODC_18630 overlap by 26 nucleotides
MCAODC_18630 and ydjF are separated by 117 nucleotides
ydjF and ydjG are separated by 136 nucleotides
ydjG and rbsK are separated by 9 nucleotides
MCAODC_18625: MCAODC_18625 - IS3 family transposase, at 583,831 to 584,718
_18625
MCAODC_18630: MCAODC_18630 - Insertion sequence 2 OrfA protein, at 584,693 to 584,863
_18630
MCAODC_18635: ydjF - Uncharacterized HTH-type transcriptional regulator YdjF, at 584,981 to 585,739
ydjF
MCAODC_18640: ydjG - NADH-dependent methylglyoxal reductase, at 585,876 to 586,856
ydjG
MCAODC_18645: rbsK - sugar kinase, at 586,866 to 587,798
rbsK
Group
Condition
MCAODC
_18625
MCAODC
_18630
MCAODC
_18635
MCAODC
_18640
MCAODC
_18645
ydjF
ydjG
rbsK
phage
Bas09
N.D.
N.D.
-0.8
-0.2
-0.6
phage
Bas14
N.D.
N.D.
-0.7
+0.3
-0.6
carbon source
Casamino-acids
N.D.
N.D.
-0.3
-0.1
-0.3
phage
Bas09
N.D.
N.D.
-0.8
-0.1
+0.4
phage
WM_Bas41
N.D.
N.D.
+0.1
-0.2
-0.5
carbon source
Sodium-DL-Lactate
N.D.
N.D.
-0.0
-0.2
-0.1
phage
TP9
N.D.
N.D.
-0.6
+0.1
+0.2
no phage control
Control_ECRC101_WM
N.D.
N.D.
+0.2
-0.0
-0.5
phage
WM_Bas14
N.D.
N.D.
-0.1
+0.0
-0.3
phage
WM_TP9
N.D.
N.D.
-0.4
+0.0
+0.1
phage
WM_TP9
N.D.
N.D.
-0.3
-0.1
+0.1
carbon source
Sodium-DL-Lactate
N.D.
N.D.
+0.1
-0.0
-0.3
phage
Bas14
N.D.
N.D.
-0.6
+0.3
+0.0
carbon source
D-Glucose
N.D.
N.D.
-0.4
+0.0
+0.3
no phage control
Control_ECRC101_WM
N.D.
N.D.
-0.0
-0.1
+0.1
phage
EV240
N.D.
N.D.
+0.2
-0.1
-0.1
phage
WM_EV240
N.D.
N.D.
-0.4
+0.1
+0.3
carbon source
L-Arabinose
N.D.
N.D.
+0.1
-0.2
+0.2
phage
WM_RB68
N.D.
N.D.
+0.2
+0.3
-0.3
phage
EV240
N.D.
N.D.
+0.1
+0.1
-0.0
phage
WM_Bas09
N.D.
N.D.
+0.0
+0.1
+0.1
phage
WM_Bas09
N.D.
N.D.
+0.2
-0.0
+0.2
carbon source
Casamino-acids
N.D.
N.D.
+0.1
+0.0
+0.4
carbon source
L-Arabinose
N.D.
N.D.
+0.4
+0.1
+0.2
phage
WM_EV240
N.D.
N.D.
+0.9
+0.3
-0.5
carbon source
D-Glucose
N.D.
N.D.
+0.4
+0.1
+0.2
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