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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
ydiR and ydiS are separated by 55 nucleotides
ydiS and ydiT overlap by 4 nucleotides
ydiT and fadK are separated by 56 nucleotides
fadK and ppsA are separated by 160 nucleotides
MCAODC_18245: ydiR - electron transfer flavoprotein subunit alpha, at 509,384 to 510,322
ydiR
MCAODC_18250: ydiS - putative electron transfer flavoprotein-quinone oxidoreductase YdiS, at 510,378 to 511,667
ydiS
MCAODC_18255: ydiT - Ferredoxin-like protein YdiT, at 511,664 to 511,957
ydiT
MCAODC_18260: fadK - medium-chain fatty-acid--CoA ligase, at 512,014 to 513,555
fadK
MCAODC_18265: ppsA - phosphoenolpyruvate synthase, at 513,716 to 516,094
ppsA
Group
Condition
MCAODC
_18245
MCAODC
_18250
MCAODC
_18255
MCAODC
_18260
MCAODC
_18265
ydiR
ydiS
ydiT
fadK
ppsA
carbon source
Sodium-DL-Lactate
-0.1
-0.5
+0.2
+0.1
-5.1
carbon source
Sodium-DL-Lactate
+0.0
-0.0
+0.6
+0.1
-5.4
phage
WM_EV240
-0.2
-0.2
-2.1
-0.1
-0.2
phage
WM_EV240
-0.2
-0.3
-2.0
-0.1
+0.3
phage
WM_Bas41
-0.2
-0.6
-1.2
-0.3
-0.0
carbon source
Casamino-acids
-0.1
+0.3
-2.4
+0.4
-0.3
phage
WM_TP9
-0.1
-0.3
-0.5
-0.1
-0.5
phage
EV240
+0.1
-0.2
-1.3
+0.2
-0.1
phage
WM_RB68
-0.1
+0.0
-1.4
+0.1
+0.1
phage
TP9
+0.2
-0.1
-0.7
+0.1
-0.5
phage
WM_Bas14
+0.3
-0.2
-0.9
-0.1
+0.2
phage
WM_TP9
-0.2
-0.2
-0.6
+0.2
+0.1
no phage control
Control_ECRC101_WM
+0.0
-0.3
-0.4
+0.1
+0.2
carbon source
D-Glucose
-0.9
+0.1
+0.4
+0.1
-0.0
no phage control
Control_ECRC101_WM
-0.1
-0.3
+0.1
-0.0
+0.1
phage
Bas14
+0.1
+0.1
+0.2
+0.1
-0.8
carbon source
L-Arabinose
-0.2
+0.0
-0.1
+0.0
+0.1
phage
Bas14
+0.0
-0.3
+0.7
+0.1
-0.7
carbon source
D-Glucose
-0.0
+0.3
-0.6
+0.3
-0.0
carbon source
Casamino-acids
+0.1
+0.2
+0.1
-0.1
-0.2
phage
WM_Bas09
-0.1
+0.4
-0.3
-0.0
+0.1
phage
Bas09
-0.1
+0.1
+0.7
-0.2
-0.2
phage
Bas09
+0.3
-0.4
+0.7
+0.3
-0.2
carbon source
L-Arabinose
+0.2
+0.2
+0.1
+0.1
+0.1
phage
EV240
-0.0
+0.5
+0.3
+0.2
-0.0
phage
WM_Bas09
+0.0
+0.3
+0.8
+0.2
+0.2
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