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Protein
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Fitness for 5 genes in
Escherichia coli ECRC101
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500 nt
ldtE and sufE are separated by 148 nucleotides
sufE and sufS are separated by 12 nucleotides
sufS and sufD overlap by 4 nucleotides
sufD and sufC overlap by 26 nucleotides
MCAODC_18130: ldtE - L,D-transpeptidase LdtE, at 486,701 to 487,705
ldtE
MCAODC_18135: sufE - cysteine desulfuration protein SufE, at 487,854 to 488,270
sufE
MCAODC_18140: sufS - cysteine desulfurase SufS, at 488,283 to 489,503
sufS
MCAODC_18145: sufD - Fe-S cluster assembly protein SufD, at 489,500 to 490,771
sufD
MCAODC_18150: sufC - Fe-S cluster assembly ATPase SufC, at 490,746 to 491,492
sufC
Group
Condition
MCAODC
_18130
MCAODC
_18135
MCAODC
_18140
MCAODC
_18145
MCAODC
_18150
ldtE
sufE
sufS
sufD
sufC
phage
WM_TP9
+0.2
N.D.
-0.2
-0.5
-0.2
phage
EV240
-0.9
N.D.
-0.6
+0.1
+0.7
carbon source
Casamino-acids
-0.3
N.D.
+0.2
-0.2
-0.3
carbon source
Casamino-acids
+0.0
N.D.
-0.1
+0.0
-0.3
carbon source
L-Arabinose
+0.0
N.D.
+0.1
+0.3
-0.6
phage
TP9
-0.5
N.D.
+0.0
+0.1
+0.3
phage
Bas14
+0.3
N.D.
-0.4
-0.5
+0.6
phage
EV240
+0.4
N.D.
-0.5
-0.3
+0.3
carbon source
Sodium-DL-Lactate
-0.3
N.D.
+0.4
-0.1
-0.0
no phage control
Control_ECRC101_WM
-0.3
N.D.
+0.1
+0.1
+0.1
carbon source
D-Glucose
-0.1
N.D.
-0.0
-0.0
+0.3
phage
WM_RB68
-0.2
N.D.
+0.5
+0.1
-0.1
phage
WM_TP9
+0.2
N.D.
-0.1
+0.2
-0.0
phage
Bas09
-0.1
N.D.
-0.2
+0.1
+0.5
phage
WM_Bas09
+0.2
N.D.
+0.4
+0.2
-0.5
carbon source
D-Glucose
+0.3
N.D.
+0.1
-0.0
+0.1
phage
WM_Bas14
+0.1
N.D.
+0.1
+0.2
+0.1
phage
WM_EV240
-0.3
N.D.
+0.7
+0.1
+0.1
phage
WM_Bas41
+0.1
N.D.
+0.2
+0.4
+0.2
no phage control
Control_ECRC101_WM
+0.2
N.D.
+0.4
+0.1
+0.0
carbon source
Sodium-DL-Lactate
+0.2
N.D.
+0.2
+0.3
-0.0
phage
WM_Bas09
+0.4
N.D.
+0.3
-0.1
+0.3
phage
Bas14
+0.2
N.D.
+0.0
+0.5
+0.4
carbon source
L-Arabinose
+0.1
N.D.
+0.5
+0.2
+0.4
phage
Bas09
+0.2
N.D.
+0.2
+0.5
+0.5
phage
WM_EV240
+0.9
N.D.
+0.1
+0.6
+0.3
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