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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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500 nt
rsxD and rsxG are separated by 3 nucleotides
rsxG and rsxE are separated by 3 nucleotides
rsxE and nth overlap by 1 nucleotides
nth and MCAODC_17890 are separated by 127 nucleotides
MCAODC_17870: rsxD - electron transport complex subunit RsxD, at 438,138 to 439,196
rsxD
MCAODC_17875: rsxG - electron transport complex subunit RsxG, at 439,200 to 439,820
rsxG
MCAODC_17880: rsxE - electron transport complex subunit RsxE, at 439,824 to 440,519
rsxE
MCAODC_17885: nth - endonuclease III, at 440,519 to 441,154
nth
MCAODC_17890: MCAODC_17890 - hypothetical protein, at 441,282 to 441,482
_17890
Group
Condition
MCAODC
_17870
MCAODC
_17875
MCAODC
_17880
MCAODC
_17885
MCAODC
_17890
rsxD
rsxG
rsxE
nth
phage
WM_EV240
-2.8
-1.3
-2.9
-0.2
N.D.
phage
WM_EV240
-1.9
-2.5
-2.5
+0.2
N.D.
phage
EV240
-1.8
-1.9
-3.3
+0.6
N.D.
phage
Bas14
-1.3
-2.8
-3.2
+1.5
N.D.
phage
EV240
-1.3
-1.6
-2.2
+0.4
N.D.
phage
Bas14
-1.0
-1.3
-1.2
-0.0
N.D.
phage
Bas09
-0.8
-1.5
-0.3
-0.1
N.D.
phage
WM_Bas41
-0.5
-0.6
-0.8
-0.6
N.D.
phage
Bas09
-0.5
-3.0
+0.6
+1.2
N.D.
no phage control
Control_ECRC101_WM
-0.5
+0.4
-0.8
-0.6
N.D.
carbon source
L-Arabinose
-0.3
-0.3
-0.1
-0.7
N.D.
carbon source
Sodium-DL-Lactate
-0.1
+0.3
-1.0
-0.7
N.D.
phage
WM_RB68
-0.3
-0.6
-0.3
-0.2
N.D.
phage
WM_Bas14
-0.1
-0.1
-0.6
-0.2
N.D.
phage
WM_Bas09
-0.0
-0.3
-0.1
-0.5
N.D.
phage
WM_TP9
-0.4
+0.2
-0.6
-0.0
N.D.
carbon source
D-Glucose
-0.1
-0.5
-0.1
-0.1
N.D.
phage
WM_TP9
-0.3
-0.2
-0.4
+0.2
N.D.
carbon source
L-Arabinose
-0.1
+0.1
-0.2
-0.2
N.D.
carbon source
Casamino-acids
-0.1
+0.2
-0.1
-0.3
N.D.
phage
TP9
-0.7
+0.3
+0.0
+0.3
N.D.
phage
WM_Bas09
-0.7
-0.3
+0.7
+0.2
N.D.
carbon source
Sodium-DL-Lactate
-0.2
+0.4
-0.5
+0.2
N.D.
no phage control
Control_ECRC101_WM
-0.4
+0.3
+0.3
-0.0
N.D.
carbon source
D-Glucose
+0.0
+1.0
-0.1
-0.2
N.D.
carbon source
Casamino-acids
+0.3
+0.9
+0.7
-0.8
N.D.
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