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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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500 nt
ydgT and ydgK are separated by 85 nucleotides
ydgK and rsxA are separated by 76 nucleotides
rsxA and rsxB overlap by 1 nucleotides
rsxB and rsxC overlap by 8 nucleotides
MCAODC_17845: ydgT - transcription modulator YdgT, at 433,849 to 434,064
ydgT
MCAODC_17850: ydgK - Inner membrane protein YdgK, at 434,150 to 434,590
ydgK
MCAODC_17855: rsxA - electron transport complex subunit RsxA, at 434,667 to 435,248
rsxA
MCAODC_17860: rsxB - electron transport complex subunit RsxB, at 435,248 to 435,826
rsxB
MCAODC_17865: rsxC - electron transport complex subunit RsxC, at 435,819 to 438,137
rsxC
Group
Condition
MCAODC
_17845
MCAODC
_17850
MCAODC
_17855
MCAODC
_17860
MCAODC
_17865
ydgT
ydgK
rsxA
rsxB
rsxC
phage
WM_EV240
+1.5
+0.2
-4.2
-1.9
-1.8
phage
WM_EV240
+0.0
+0.5
-1.0
-1.5
-2.2
phage
EV240
+1.6
+0.3
-3.2
-1.3
-1.7
phage
Bas14
+0.5
+0.4
-1.2
-2.4
-1.1
phage
Bas14
-0.2
+0.8
-0.6
-1.9
-1.4
phage
Bas09
+0.7
+0.2
-1.4
-1.7
-0.5
phage
EV240
+2.0
+0.5
-0.9
-2.2
-1.9
carbon source
Casamino-acids
-0.3
+0.3
-1.2
-0.7
+0.2
no phage control
Control_ECRC101_WM
-0.3
+0.5
+0.2
-1.3
-0.6
carbon source
D-Glucose
-0.8
+0.1
-1.0
+0.3
-0.1
no phage control
Control_ECRC101_WM
-0.3
+0.2
-0.7
-0.2
-0.2
phage
WM_TP9
+0.1
+0.3
-0.3
-0.8
-0.4
carbon source
Sodium-DL-Lactate
+0.4
-0.0
-0.3
-0.3
-0.7
phage
WM_Bas09
-0.5
-0.1
-0.3
+0.4
-0.2
carbon source
L-Arabinose
-0.6
+0.1
+0.5
-0.5
-0.0
phage
WM_TP9
+0.2
-0.3
+0.1
-0.1
-0.4
phage
WM_Bas41
-0.4
-0.1
+1.0
-0.3
-0.7
phage
WM_Bas09
-0.5
-0.0
+0.8
+0.1
-0.3
carbon source
D-Glucose
-0.2
+0.4
-0.4
+0.2
+0.1
phage
Bas09
+0.8
+0.4
+1.0
-1.2
-0.8
phage
WM_RB68
-0.0
+0.2
-0.0
+0.4
+0.0
carbon source
Casamino-acids
-0.4
+0.2
+0.5
+0.5
-0.2
phage
TP9
-0.0
+0.5
+0.5
-0.1
-0.0
carbon source
Sodium-DL-Lactate
+0.6
+0.3
-0.6
+0.5
+0.1
phage
WM_Bas14
-0.0
-0.1
+0.4
+0.5
+0.0
carbon source
L-Arabinose
+0.3
+0.2
+0.7
-0.2
+0.1
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